RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 SLITRK1Q96PX8 696 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 CNPY3Q9BT09 278 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 ST6GALNAC4Q9H4F1 302 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 TUT1Q9H6E5 874 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 BFARQ9NZS9 450 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 APOBEC2Q9Y235 224 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 MAST2Q6P0Q8 1798 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 GSC2O15499 205 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 CRCPO75575 148 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 C4BPAP04003 597 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 SNRPAP09012 282 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 CYP2C8P10632 490 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 CETPP11597 493 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 EIF4BP23588 611 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 GNL1P36915 607 aaPredicted RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 TREML2Q5T2D2 321 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 ARID3BQ8IVW6 561 aaPredicted RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 CRYGNQ8WXF5 182 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 ALKBH8Q96BT7 664 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 CCDC124Q96CT7 223 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 PPP1R36Q96LQ0 422 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 SHANK3Q9BYB0 1731 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 SPECC1L-ADORA2AF8WAN1 911 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 LIASO43766 372 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 KRT36O76013 467 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 CFHP08603 1231 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 NFICP08651 508 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 CTSHP09668 335 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 IVDP26440 423 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 BMPR2Q13873 1038 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 ZC3H12AQ5D1E8 599 aaKnown RBP10.84□□□□□ -0.67
RNF40-204ENST00000563683 TNIP3Q96KP6 325 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 NDNQ99608 321 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 CEP41Q9BYV8 373 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 ATXN10Q9UBB4 475 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 HEY2Q9UBP5 337 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 COMMD3-BMI1R4GMX3 469 aa10.84□□□□□ -0.67
RNF40-204ENST00000563683 E5RJQ4 531 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 TP73O15350 636 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 MICAL2O94851 1124 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 MOCS2O96007 188 aaPredicted RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 ASS1P00966 412 aaKnown RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 SLC4A1P02730 911 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 PYGLP06737 847 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 SRGAP2BP0DMP2 458 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 PYGBP11216 843 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 SNAPC2Q13487 334 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 MAP7Q14244 749 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 NPNTQ6UXI9 565 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 OTOAQ7RTW8 1153 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 RSPH3Q86UC2 560 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 METTL23Q86XA0 190 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 SCN4BQ8IWT1 228 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 ST13P4Q8IZP2 240 aaPredicted RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 ZCCHC9Q8N567 271 aaKnown RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 TCP10LQ8TDR4 215 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 ZNF516Q92618 1163 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 ZNF75CPQ92670 426 aaPredicted RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 KLRG1Q96E93 195 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 APOBEC3GQ9HC16 384 aaKnown RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 SETD4Q9NVD3 440 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 GPC4O75487 556 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 ACSBG2Q5FVE4 666 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 RFWD3Q6PCD5 774 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 LCA5Q86VQ0 697 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 GABPB2Q8TAK5 448 aaPredicted RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 SPOCK2Q92563 424 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 OSMRQ99650 979 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 VPS33BQ9H267 617 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 SNTG2Q9NY99 539 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 EURLQ9NYK6 297 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 TMCO1Q9UM00 188 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 SHOC2Q9UQ13 582 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 OPHN1O60890 802 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 ZFXP17010 805 aaPredicted RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 MMP8P22894 467 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 KDELR1P24390 212 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 RPA3P35244 121 aaPredicted RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 MMRN1Q13201 1228 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 STILQ15468 1287 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 JOSD2Q8TAC2 188 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 USP33Q8TEY7 942 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 FIZ1Q96SL8 496 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 ACO2Q99798 780 aaKnown RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 TMEM134Q9H6X4 195 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 ZNF214Q9UL59 606 aaPredicted RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 MTO1Q9Y2Z2 717 aaKnown RBP10.83□□□□□ -0.68
RNF40-204ENST00000563683 HES2Q9Y543 173 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 PDE4DIPQ5VU43 2346 aa10.83□□□□□ -0.68
RNF40-204ENST00000563683 MYH11P35749 1972 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 NFASCO94856 1347 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 TBX10O75333 385 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 AKAP5P24588 427 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 ADRA1DP25100 572 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 PGM1P36871 562 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 RTP1P59025 263 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 C1orf146Q5VVC0 180 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 PHF13Q86YI8 300 aaPredicted RBP10.82□□□□□ -0.68
RNF40-204ENST00000563683 ZNF560Q96MR9 790 aa10.82□□□□□ -0.68
RNF40-204ENST00000563683 MIPEPQ99797 713 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms