RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 SPATA21Q7Z572 469 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 NDRG1Q92597 394 aaKnown RBP16.96■□□□□ 0.31
AP4E1-205ENST00000561393 ACTR5Q9H9F9 607 aaPredicted RBP16.96■□□□□ 0.31
AP4E1-205ENST00000561393 G3BP2Q9UN86 482 aaKnown RBP16.96■□□□□ 0.31
AP4E1-205ENST00000561393 TRIM49D1C9J1S8 452 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 BANF1O75531 89 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 YWHAHQ04917 246 aaPredicted RBP16.96■□□□□ 0.31
AP4E1-205ENST00000561393 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.96■□□□□ 0.31
AP4E1-205ENST00000561393 NUDCD3Q8IVD9 361 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 PDCD6IPQ8WUM4 868 aaKnown RBP16.96■□□□□ 0.31
AP4E1-205ENST00000561393 PCMTD2Q9NV79 361 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 SBF2Q86WG5 1849 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 ADAMTSL1Q8N6G6 1762 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 PPEF2O14830 753 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 NPR3P17342 541 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 RPL22P35268 128 aaKnown RBP16.96■□□□□ 0.31
AP4E1-205ENST00000561393 MAGEA9P43362 315 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 SP3Q02447 781 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 POLNQ7Z5Q5 900 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 MCUQ8NE86 351 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 PAFAH2Q99487 392 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 DPEP3Q9H4B8 488 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 IPO11Q9UI26 975 aaKnown RBP16.96■□□□□ 0.31
AP4E1-205ENST00000561393 FIS1Q9Y3D6 152 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 C3orf70A6NLC5 250 aaPredicted RBP16.95■□□□□ 0.3
AP4E1-205ENST00000561393 CD48P09326 243 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 GRB14Q14449 540 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 SDCCAG8Q86SQ7 713 aaPredicted RBP16.95■□□□□ 0.3
AP4E1-205ENST00000561393 RASSF3Q86WH2 238 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 DCLK2Q8N568 766 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 CELF6Q96J87 481 aaKnown RBP16.95■□□□□ 0.3
AP4E1-205ENST00000561393 ZNF512Q96ME7 567 aaPredicted RBP16.95■□□□□ 0.3
AP4E1-205ENST00000561393 RNF39Q9H2S5 420 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 DONSONQ9NYP3 566 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 CACNG4Q9UBN1 327 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 TYW5A2RUC4 315 aaKnown RBP16.95■□□□□ 0.3
AP4E1-205ENST00000561393 CRHR2Q13324 411 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 PCBP1Q15365 356 aaKnown RBP eCLIP16.95■□□□□ 0.3
AP4E1-205ENST00000561393 ATG16L1Q676U5 607 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 TXNRD3NBQ6F5E7 133 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 RIBC1Q8N443 379 aaPredicted RBP16.95■□□□□ 0.3
AP4E1-205ENST00000561393 OR6P1Q8NGX9 317 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 ZNF669Q96BR6 464 aaPredicted RBP16.95■□□□□ 0.3
AP4E1-205ENST00000561393 STAMBPL1Q96FJ0 436 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 RNF157Q96PX1 679 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 PRDM5Q9NQX1 630 aaPredicted RBP16.95■□□□□ 0.3
AP4E1-205ENST00000561393 SIX4Q9UIU6 781 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 PCDHB7Q9Y5E2 793 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 CIB2O75838 187 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 TMEM130Q8N3G9 435 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 RYBPQ8N488 228 aaPredicted RBP16.95■□□□□ 0.3
AP4E1-205ENST00000561393 ZCCHC9Q8N567 271 aaKnown RBP16.95■□□□□ 0.3
AP4E1-205ENST00000561393 ALLCQ8N6M5 410 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 C16orf70Q9BSU1 422 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 CDHR5Q9HBB8 845 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 ANKRD31Q8N7Z5 1873 aa16.95■□□□□ 0.3
AP4E1-205ENST00000561393 GIPC1O14908 333 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 FBXO21O94952 628 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 DPYSL3Q14195 570 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 PCSK7Q16549 785 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 ZNF467Q7Z7K2 595 aaPredicted RBP16.94■□□□□ 0.3
AP4E1-205ENST00000561393 UNC45BQ8IWX7 931 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 IPMKQ8NFU5 416 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 PGM2Q96G03 612 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 HSFY1Q96LI6 401 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 LRRC37BQ96QE4 947 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 UBP1Q9NZI7 540 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 ARHGAP42A6NI28 874 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 ZBBXA8MT70 800 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 DUSP11O75319 330 aaKnown RBP16.94■□□□□ 0.3
AP4E1-205ENST00000561393 F9P00740 461 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 BRCC3P46736 316 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 POU5F1BQ06416 359 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 CRLF3Q8IUI8 442 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 JCHAINP01591 159 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 ASGR1P07306 291 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 SNRPAP09012 282 aaKnown RBP16.94■□□□□ 0.3
AP4E1-205ENST00000561393 LMO2P25791 158 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 CTXN3Q4LDR2 81 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 C10orf120Q5SQS8 335 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 FAM182AQ5T1J6 154 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 ZBED2Q9BTP6 218 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 PPARGC1AQ9UBK2 798 aaKnown RBP16.94■□□□□ 0.3
AP4E1-205ENST00000561393 MORF4L1Q9UBU8 362 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 TMEM59LQ9UK28 342 aa16.94■□□□□ 0.3
AP4E1-205ENST00000561393 USP15Q9Y4E8 981 aaPredicted RBP16.94■□□□□ 0.3
AP4E1-205ENST00000561393 EDN1P05305 212 aa16.93■□□□□ 0.3
AP4E1-205ENST00000561393 PTGIRP43119 386 aa16.93■□□□□ 0.3
AP4E1-205ENST00000561393 AUHQ13825 339 aaKnown RBP16.93■□□□□ 0.3
AP4E1-205ENST00000561393 NDUFAF2Q8N183 169 aa16.93■□□□□ 0.3
AP4E1-205ENST00000561393 SMARCD1Q96GM5 515 aa16.93■□□□□ 0.3
AP4E1-205ENST00000561393 XAB2Q9HCS7 855 aaKnown RBP16.93■□□□□ 0.3
AP4E1-205ENST00000561393 RPS6KL1Q9Y6S9 549 aa16.93■□□□□ 0.3
AP4E1-205ENST00000561393 DNAJC25-GNG10A0A024R161 153 aa16.93■□□□□ 0.3
AP4E1-205ENST00000561393 SPAG6O75602 509 aa16.93■□□□□ 0.3
AP4E1-205ENST00000561393 LTFP02788 710 aa16.93■□□□□ 0.3
AP4E1-205ENST00000561393 RAB27AP51159 221 aa16.93■□□□□ 0.3
AP4E1-205ENST00000561393 SH3PXD2AQ5TCZ1 1133 aa16.93■□□□□ 0.3
AP4E1-205ENST00000561393 PDCD7Q8N8D1 485 aaKnown RBP16.93■□□□□ 0.3
AP4E1-205ENST00000561393 COLGALT1Q8NBJ5 622 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms