RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 PDCLQ13371 301 aa14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 TRIM14Q14142 442 aa14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 PDGFRLQ15198 375 aa14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 TRIM67Q6ZTA4 783 aa14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 BMP8AQ7Z5Y6 402 aa14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 C1orf131Q8NDD1 294 aaKnown RBP14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 RSAD2Q8WXG1 361 aa14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 DDX1Q92499 740 aaKnown RBP14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 OTUB2Q96DC9 234 aa14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 SHDQ96IW2 340 aa14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 BRD9Q9H8M2 597 aa14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 TBC1D14Q9P2M4 693 aa14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 DNMT3LQ9UJW3 386 aa14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 HELZP42694 1942 aaKnown RBP14.67□□□□□ -0.06
PKNOX1-209ENST00000560448 TULP2O00295 520 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 GFPT2O94808 682 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 RARGP13631 454 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 SCNN1AP37088 669 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 COG7P83436 770 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 AMPD2Q01433 879 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 PRKCQQ04759 706 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 MTF1Q14872 753 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 ZNF77Q15935 545 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 BTBD8Q5XKL5 378 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 DENND1BQ6P3S1 775 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 C17orf53Q8N3J3 647 aaPredicted RBP14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 SYN2Q92777 582 aaPredicted RBP14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 RPP25Q9BUL9 199 aaKnown RBP14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 TTYH3Q9C0H2 523 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 RNF38Q9H0F5 515 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 ACP6Q9NPH0 428 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 ST7Q9NRC1 585 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 ASNSD1Q9NWL6 643 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 AIPL1Q9NZN9 384 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 STRIP2Q9ULQ0 834 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 CPQQ9Y646 472 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 KIF26AQ9ULI4 1882 aaPredicted RBP14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 CUL9Q8IWT3 2517 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 A0A1W2PQH9 124 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 E2F8A0AVK6 867 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 PNMA6AP0CW24 399 aaPredicted RBP14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 LCP1P13796 627 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 KPNA1P52294 538 aaPredicted RBP14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 GPC5P78333 572 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 EFHC1Q5JVL4 640 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 SPECC1LQ69YQ0 1117 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 TOGARAM2Q6ZUX3 1019 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 RSRC2Q7L4I2 434 aaKnown RBP14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 SCD5Q86SK9 330 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 NOP9Q86U38 636 aaKnown RBP14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 SH3RF2Q8TEC5 729 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 RNF139Q8WU17 664 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 OSCP1Q8WVF1 389 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 BAP1Q92560 729 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 EXOC4Q96A65 974 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 PPP1R13BQ96KQ4 1090 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 SLC22A12Q96S37 553 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 CYP2S1Q96SQ9 504 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 NMUR1Q9HB89 426 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 NOCTQ9UK39 431 aaKnown RBP14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 FBXL21Q9UKT6 434 aa14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 BZW2Q9Y6E2 419 aaKnown RBP14.66□□□□□ -0.06
PKNOX1-209ENST00000560448 LEFTY2O00292 366 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 ARNTLO00327 626 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 GPR37L1O60883 481 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 LTFP02788 710 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 CYP1A1P04798 512 aaPredicted RBP14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 TPM1P09493 284 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 SKILP12757 684 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 GDI1P31150 447 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 RGS7P49802 495 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 NNTQ13423 1086 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 C10orf120Q5SQS8 335 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 BSPRYQ5W0U4 402 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 BHLHA9Q7RTU4 235 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 CSGALNACT1Q8TDX6 532 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 ATP2A3Q93084 1043 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 ASIC4Q96FT7 647 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 FAM83CQ9BQN1 747 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 PLA2G2FQ9BZM2 168 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 SYNCQ9H7C4 482 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 C8orf33Q9H7E9 229 aaPredicted RBP14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 CCSER2Q9H7U1 834 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 ARHGEF3Q9NR81 526 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 KCND1Q9NSA2 647 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 CCL26Q9Y258 94 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 ZNF510Q9Y2H8 683 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 SH3BP1Q9Y3L3 701 aa14.65□□□□□ -0.06
PKNOX1-209ENST00000560448 YJEFN3A6XGL0 299 aa14.64□□□□□ -0.07
PKNOX1-209ENST00000560448 PRR33A8MZF0 331 aa14.64□□□□□ -0.07
PKNOX1-209ENST00000560448 E5RJQ4 531 aa14.64□□□□□ -0.07
PKNOX1-209ENST00000560448 E7ENQ6 273 aa14.64□□□□□ -0.07
PKNOX1-209ENST00000560448 MAN2B1O00754 1011 aa14.64□□□□□ -0.07
PKNOX1-209ENST00000560448 NARSO43776 548 aaKnown RBP14.64□□□□□ -0.07
PKNOX1-209ENST00000560448 HSF2BPO75031 334 aa14.64□□□□□ -0.07
PKNOX1-209ENST00000560448 PRKCIP41743 596 aa14.64□□□□□ -0.07
PKNOX1-209ENST00000560448 GABRB2P47870 512 aa14.64□□□□□ -0.07
PKNOX1-209ENST00000560448 ZBED6P86452 979 aa14.64□□□□□ -0.07
PKNOX1-209ENST00000560448 NR1H3Q13133 447 aa14.64□□□□□ -0.07
PKNOX1-209ENST00000560448 MTA1Q13330 715 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms