RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 PDIA4P13667 645 aaKnown RBP11.8□□□□□ -0.52
LINC02253-202ENST00000560314 GABRG2P18507 467 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 ITPKAP23677 461 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 RDXP35241 583 aaKnown RBP11.8□□□□□ -0.52
LINC02253-202ENST00000560314 MAPK8P45983 427 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 GFPT1Q06210 699 aaPredicted RBP11.8□□□□□ -0.52
LINC02253-202ENST00000560314 SEMA3BQ13214 749 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 NCOA4Q13772 614 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 GRAMD4Q6IC98 578 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 SDE2Q6IQ49 451 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 KLHDC10Q6PID8 442 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 PAQR9Q6ZVX9 377 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 HTR3DQ70Z44 454 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 PIP4P1Q86T03 277 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 UNC93AQ86WB7 457 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 FUKQ8N0W3 1084 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 PARD3BQ8TEW8 1205 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 TAF4BQ92750 862 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 CAPN10Q9HC96 672 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 CSNK1G1Q9HCP0 422 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 PNPLA8Q9NP80 782 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 CYLDQ9NQC7 956 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINC02253-202ENST00000560314 MARK1Q9P0L2 795 aa11.8□□□□□ -0.52
LINC02253-202ENST00000560314 LSM7Q9UK45 103 aaKnown RBP11.8□□□□□ -0.52
LINC02253-202ENST00000560314 ATXN2Q99700 1313 aaKnown RBP11.8□□□□□ -0.52
LINC02253-202ENST00000560314 IGHV1OR15-9A0A0B4J2B8 117 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 A0A1W2PQD8 194 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 OPHN1O60890 802 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 RPN1P04843 607 aaKnown RBP11.79□□□□□ -0.52
LINC02253-202ENST00000560314 CENPBP07199 599 aaPredicted RBP11.79□□□□□ -0.52
LINC02253-202ENST00000560314 SYPP08247 313 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 ZNF33AQ06730 810 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 SHC4Q6S5L8 630 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 SCARA5Q6ZMJ2 495 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 TADA2BQ86TJ2 420 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 TMEM25Q86YD3 366 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 SLC9A9Q8IVB4 645 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 CHPFQ8IZ52 775 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 FRMD1Q8N878 549 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 NAT16Q8N8M0 369 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 GABRG3Q99928 467 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 DNAJC17Q9NVM6 304 aaKnown RBP11.79□□□□□ -0.52
LINC02253-202ENST00000560314 WDR35Q9P2L0 1181 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 SUSD2Q9UGT4 822 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 CHORDC1Q9UHD1 332 aaPredicted RBP11.79□□□□□ -0.52
LINC02253-202ENST00000560314 MSRB2Q9Y3D2 182 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 PCDHA5Q9Y5H7 936 aa11.79□□□□□ -0.52
LINC02253-202ENST00000560314 ACACAQ13085 2346 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 CKAP5Q14008 2032 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 A0A1W2PQF6 199 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 LRRIQ3A6PVS8 624 aaPredicted RBP11.78□□□□□ -0.52
LINC02253-202ENST00000560314 NEDD8-MDP1E9PL57 170 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 K7ELQ4 463 aaPredicted RBP11.78□□□□□ -0.52
LINC02253-202ENST00000560314 GFRA2O00451 464 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 NPC1O15118 1278 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 POLR2DO15514 142 aaKnown RBP11.78□□□□□ -0.52
LINC02253-202ENST00000560314 C4BPAP04003 597 aaKnown RBP11.78□□□□□ -0.52
LINC02253-202ENST00000560314 FAM200BP0CF97 657 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 IRF1P10914 325 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 NDUFV2P19404 249 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 SPINK2P20155 84 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 ATP5C1P36542 298 aaKnown RBP11.78□□□□□ -0.52
LINC02253-202ENST00000560314 CASP4P49662 377 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 CDH8P55286 799 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 SLC14A1Q13336 389 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 ZNF423Q2M1K9 1284 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 SGSM1Q2NKQ1 1148 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 ZACNQ401N2 412 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 ACOT1Q86TX2 421 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 CRYBG2Q8N1P7 616 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 ZMIZ2Q8NF64 920 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 IPO4Q8TEX9 1081 aaKnown RBP11.78□□□□□ -0.52
LINC02253-202ENST00000560314 ZCCHC14Q8WYQ9 949 aaKnown RBP11.78□□□□□ -0.52
LINC02253-202ENST00000560314 BBS2Q9BXC9 721 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
LINC02253-202ENST00000560314 SDCBP2Q9H190 292 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 FAM124BQ9H5Z6 455 aaPredicted RBP11.78□□□□□ -0.52
LINC02253-202ENST00000560314 CD248Q9HCU0 757 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 SLC39A2Q9NP94 309 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 ZDHHC4Q9NPG8 344 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 DNAAF2Q9NVR5 837 aaKnown RBP11.78□□□□□ -0.52
LINC02253-202ENST00000560314 FAM13BQ9NYF5 915 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 SCML2Q9UQR0 700 aa11.78□□□□□ -0.52
LINC02253-202ENST00000560314 ARHGAP33O14559 1287 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 IKBKBO14920 756 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 GREM1O60565 184 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 VNN1O95497 513 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 CCDC130P13994 396 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 TYRP14679 529 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 DGKGP49619 791 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 ZNF132P52740 706 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 NDST1P52848 882 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 MAP3K7CLP57077 242 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 SIM1P81133 766 aaPredicted RBP11.77□□□□□ -0.53
LINC02253-202ENST00000560314 INCA1Q0VD86 236 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 E2F5Q15329 346 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 SYCP2LQ5T4T6 812 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 EGFLAMQ63HQ2 1017 aa11.77□□□□□ -0.53
LINC02253-202ENST00000560314 MIB1Q86YT6 1006 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms