RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 USP9XQ93008 2570 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-211ENST00000559460 PTPN13Q12923 2485 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 WASH3PC4AMC7 463 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 NPC1O15118 1278 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 TRIM24O15164 1050 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 FSBPO95073 299 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 OLFM2O95897 454 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 OAS1P00973 400 aaKnown RBP10.3□□□□□ -0.76
SMAD3-211ENST00000559460 MPOP05164 745 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 IRF1P10914 325 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 CTSKP43235 329 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 LHX1P48742 406 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 ARRB1P49407 418 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-211ENST00000559460 BCAT1P54687 386 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 CDH8P55286 799 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 ERVPABLB-1P60509 514 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 GABREP78334 506 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 CYP27A1Q02318 531 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 RAD51AP2Q09MP3 1159 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 TMEM25Q86YD3 366 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 BBS7Q8IWZ6 715 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 DAW1Q8N136 415 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 CACTIN-AS1Q8N1I8 211 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 TMEM161BQ8NDZ6 487 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 PDZD8Q8NEN9 1154 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 C1orf216Q8TAB5 229 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 SNRNP27Q8WVK2 155 aaKnown RBP10.3□□□□□ -0.76
SMAD3-211ENST00000559460 NTPCRQ9BSD7 190 aaKnown RBP10.3□□□□□ -0.76
SMAD3-211ENST00000559460 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.3□□□□□ -0.761e-6■□□□□ 9.2
SMAD3-211ENST00000559460 HAPLN2Q9GZV7 340 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 MKRN2Q9H000 416 aaKnown RBP10.3□□□□□ -0.76
SMAD3-211ENST00000559460 LARSQ9P2J5 1176 aaKnown RBP10.3□□□□□ -0.76
SMAD3-211ENST00000559460 WDR35Q9P2L0 1181 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 LRWD1Q9UFC0 647 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 HCN2Q9UL51 889 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 SRPK3Q9UPE1 567 aa10.3□□□□□ -0.76
SMAD3-211ENST00000559460 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.3□□□□□ -0.76
SMAD3-211ENST00000559460 TCHHQ07283 1943 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 PRRT4C9JH25 899 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 E9PMD0 336 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 K7ENP7 123 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 CACNG3O60359 315 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 MT-CO3P00414 261 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 ADRB2P07550 413 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 SFTPCP11686 197 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 TYRP14679 529 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 CKMT2P17540 419 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 BDNFP23560 247 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 CD27P26842 260 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 FOSBP53539 338 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 E2F1Q01094 437 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 ARID5AQ03989 594 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 GOLGA8FQ08AF8 430 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 GOLGA8DPQ0D2H9 430 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 TOB2Q14106 344 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-211ENST00000559460 HS1BP3Q53T59 392 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 RINT1Q6NUQ1 792 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 INO80CQ6PI98 192 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-211ENST00000559460 XKR5Q6UX68 686 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 TPGS1Q6ZTW0 290 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 RUFY3Q7L099 469 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 CCDC83Q8IWF9 413 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 ADGRF2Q8IZF7 708 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 DCBLD1Q8N8Z6 715 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 HIC2Q96JB3 615 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
SMAD3-211ENST00000559460 RUSC1Q9BVN2 902 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 BTBD1Q9H0C5 482 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 C6orf106Q9H6K1 298 aaPredicted RBP10.29□□□□□ -0.76
SMAD3-211ENST00000559460 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
SMAD3-211ENST00000559460 LSM7Q9UK45 103 aaKnown RBP10.29□□□□□ -0.76
SMAD3-211ENST00000559460 CPSF3Q9UKF6 684 aaKnown RBP10.29□□□□□ -0.76
SMAD3-211ENST00000559460 L1RE1Q9UN81 338 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 PTPRJQ12913 1337 aa10.29□□□□□ -0.76
SMAD3-211ENST00000559460 SEMA4FO95754 770 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 IGLV3-19P01714 112 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 CR2P20023 1033 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 AFMP43652 599 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 USP46P62068 366 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 NOP14P78316 857 aaKnown RBP10.28□□□□□ -0.76
SMAD3-211ENST00000559460 NFKB2Q00653 900 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 INSM1Q01101 510 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-211ENST00000559460 TAF10Q12962 218 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 MAPK7Q13164 816 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 ECM1Q16610 540 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 DIS3L2Q8IYB7 885 aaKnown RBP10.28□□□□□ -0.76
SMAD3-211ENST00000559460 NSUN7Q8NE18 718 aaKnown RBP10.28□□□□□ -0.76
SMAD3-211ENST00000559460 TNFRSF25Q93038 417 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 FBXO32Q969P5 355 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 MYLPFQ96A32 169 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 DEPDC7Q96QD5 511 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 SYT15Q9BQS2 421 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 TTLL2Q9BWV7 592 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 LHX5Q9H2C1 402 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 CYP46A1Q9Y6A2 500 aa10.28□□□□□ -0.76
SMAD3-211ENST00000559460 ANAPC1Q9H1A4 1944 aa10.27□□□□□ -0.76
SMAD3-211ENST00000559460 A0A0B4J269 797 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 K7ENM7 598 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 WNT7AO00755 349 aa10.27□□□□□ -0.77
SMAD3-211ENST00000559460 VILLO15195 856 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms