RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 GOLGA8FQ08AF8 430 aa18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 GOLGA8DPQ0D2H9 430 aa18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 C19orf57Q0VDD7 668 aa18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 RHBDD1Q8TEB9 315 aa18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 TOE1Q96GM8 510 aaKnown RBP18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 DUSP9Q99956 384 aaKnown RBP18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 SLC6A17Q9H1V8 727 aa18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 CCSER2Q9H7U1 834 aa18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 PRDM16Q9HAZ2 1276 aa18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 CD93Q9NPY3 652 aa18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.89■□□□□ 0.616e-6■■■■■ 48.1
TSPAN3-204ENST00000558394 OLFML3Q9NRN5 406 aa18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 WDR35Q9P2L0 1181 aa18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 LSM7Q9UK45 103 aaKnown RBP18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 HCN2Q9UL51 889 aa18.89■□□□□ 0.61
TSPAN3-204ENST00000558394 ASXL3Q9C0F0 2248 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 A8MXQ7 604 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 GFRA2O00451 464 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 CLDN5O00501 218 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 CACNG3O60359 315 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 FAM163BP0C2L3 166 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 ZNF883P0CG24 379 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 TYRP14679 529 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 TXLNAP40222 546 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 CASP5P51878 434 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 SUZ12Q15022 739 aaKnown RBP18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 RRAGBQ5VZM2 374 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 TPGS1Q6ZTW0 290 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 WDR49Q8IV35 697 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 B3GALNT2Q8NCR0 500 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 DNASE2BQ8WZ79 361 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 MED10Q9BTT4 135 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 GPR174Q9BXC1 333 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 CACNA2D2Q9NY47 1150 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 NFE2L3Q9Y4A8 694 aa18.88■□□□□ 0.61
TSPAN3-204ENST00000558394 BCAT2O15382 392 aaPredicted RBP18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 FLRT2O43155 660 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 CILPO75339 1184 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 CLSTN1O94985 981 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 DGKGP49619 791 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 PTPRJQ12913 1337 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 WDR72Q3MJ13 1102 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 SNX30Q5VWJ9 437 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 STXBP4Q6ZWJ1 553 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 TRAPPC11Q7Z392 1133 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 ENGASEQ8NFI3 743 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 CADM4Q8NFZ8 388 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 SCAMP5Q8TAC9 235 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 SHROOM3Q8TF72 1996 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 EPSTI1Q96J88 318 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 B3GNT5Q9BYG0 378 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 DPEP3Q9H4B8 488 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 IL21RQ9HBE5 538 aa18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 SETXQ7Z333 2677 aaKnown RBP18.87■□□□□ 0.61
TSPAN3-204ENST00000558394 MYH10P35580 1976 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 TRABD2BA6NFA1 517 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 PRRT4C9JH25 899 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 DLATP10515 647 aaKnown RBP18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 TNNI1P19237 187 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 GJB2P29033 226 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 OXTRP30559 389 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 SLC5A3P53794 718 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 SF3A1Q15459 793 aaKnown RBP18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 DCAF12L1Q5VU92 463 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 DNAJC19Q96DA6 116 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 UBL7Q96S82 380 aaPredicted RBP18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 KCNK16Q96T55 309 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 KIAA1586Q9HCI6 787 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 CD248Q9HCU0 757 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 TMEM30AQ9NV96 361 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 WSB2Q9NYS7 404 aaPredicted RBP18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 GMIPQ9P107 970 aa18.86■□□□□ 0.61
TSPAN3-204ENST00000558394 TLR5O60602 858 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 ATXN1LP0C7T5 689 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 TRPC3Q13507 836 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 HLA-BQ31612 363 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 HTR3DQ70Z44 454 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 METTL3Q86U44 580 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 CBWD2Q8IUF1 395 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 SCUBE3Q8IX30 993 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 ADAM32Q8TC27 787 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 DMAP1Q9NPF5 467 aaPredicted RBP18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 PANK4Q9NVE7 773 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 COMMD8Q9NX08 183 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 FNDC3AQ9Y2H6 1198 aaKnown RBP18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 NME7Q9Y5B8 376 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 PCDHGB2Q9Y5G2 931 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 STON1Q9Y6Q2 735 aa18.85■□□□□ 0.61
TSPAN3-204ENST00000558394 A0A087WV48 116 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 WASH3PC4AMC7 463 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 SYNCRIPO60506 623 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 ACADMP11310 421 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 ABCG1P45844 678 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 ZNF132P52740 706 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 FUT11Q495W5 492 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 CCDC157Q569K6 752 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 PDCD7Q8N8D1 485 aaKnown RBP18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 UCMAQ8WVF2 138 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 BHMTQ93088 406 aa18.84■□□□□ 0.61
TSPAN3-204ENST00000558394 WBP2Q969T9 261 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms