RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 NECTIN1Q15223 517 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 NFE2Q16621 373 aaPredicted RBP10.06□□□□□ -0.8
NEDD1-211ENST00000557454 KRTAP21-3Q3LHN1 58 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 SGO2Q562F6 1265 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 C9orf57Q5W0N0 161 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 TMEM25Q86YD3 366 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 TMPRSS6Q8IU80 811 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 SCN4BQ8IWT1 228 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 PRCCQ92733 491 aaPredicted RBP10.06□□□□□ -0.8
NEDD1-211ENST00000557454 CCNL2Q96S94 520 aaPredicted RBP10.06□□□□□ -0.8
NEDD1-211ENST00000557454 TRIM9Q9C026 710 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 PLEKHA5Q9HAU0 1116 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 TRPM5Q9NZQ8 1165 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 TBC1D14Q9P2M4 693 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 PCDHA12Q9UN75 941 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.06□□□□□ -0.8
NEDD1-211ENST00000557454 STON1Q9Y6Q2 735 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 NUMA1Q14980 2115 aa10.06□□□□□ -0.8
NEDD1-211ENST00000557454 ANAPC1Q9H1A4 1944 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 LACTBL1A8MY62 500 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 XPOTO43592 962 aaKnown RBP10.05□□□□□ -0.8
NEDD1-211ENST00000557454 CSO75390 466 aaKnown RBP10.05□□□□□ -0.8
NEDD1-211ENST00000557454 MED24O75448 989 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 FSBPO95073 299 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 OLFM2O95897 454 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 ITGB2P05107 769 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 IFNAR1P17181 557 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 PFKLP17858 780 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 ACP1P24666 158 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 ACSL1P33121 698 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 NPTX2P47972 431 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 USP46P62068 366 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 SPATA1Q5VX52 437 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 ZNF787Q6DD87 383 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 PIK3AP1Q6ZUJ8 805 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 USP53Q70EK8 1073 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 BBS7Q8IWZ6 715 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 LEO1Q8WVC0 666 aaPredicted RBP10.05□□□□□ -0.8
NEDD1-211ENST00000557454 KIFAP3Q92845 792 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 BIRC7Q96CA5 298 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 CCDC97Q96F63 343 aaPredicted RBP10.05□□□□□ -0.8
NEDD1-211ENST00000557454 AIFM3Q96NN9 605 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 ORAI3Q9BRQ5 295 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 ACE2Q9BYF1 805 aaPredicted RBP10.05□□□□□ -0.8
NEDD1-211ENST00000557454 SLC25A18Q9H1K4 315 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 TMEM134Q9H6X4 195 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 ABCB6Q9NP58 842 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 SPHK2Q9NRA0 654 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 ARHGAP28Q9P2N2 729 aa10.05□□□□□ -0.8
NEDD1-211ENST00000557454 ADGRG4Q8IZF6 3080 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 CRYBG3Q68DQ2 2970 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 A0A1W2PNU3 283 aaPredicted RBP10.04□□□□□ -0.8
NEDD1-211ENST00000557454 ZNF840PA6NDX5 716 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 PIRO00625 290 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 VILLO15195 856 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 TOM1L1O75674 476 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 OAS1P00973 400 aaKnown RBP10.04□□□□□ -0.8
NEDD1-211ENST00000557454 CLTAP09496 248 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 MBL2P11226 248 aaPredicted RBP10.04□□□□□ -0.8
NEDD1-211ENST00000557454 PAX3P23760 479 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 CD27P26842 260 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 COPAP53621 1224 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 INHBCP55103 352 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 PEX3P56589 373 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 E2F1Q01094 437 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 PDIA5Q14554 519 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 CALCRLQ16602 461 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 ADCK5Q3MIX3 580 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 C3orf38Q5JPI3 329 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 SFMBT2Q5VUG0 894 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 CDCP2Q5VXM1 449 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 DDX42Q86XP3 938 aaKnown RBP eCLIP10.04□□□□□ -0.8
NEDD1-211ENST00000557454 CATSPER3Q86XQ3 398 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
NEDD1-211ENST00000557454 OTUB2Q96DC9 234 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 SGF29Q96ES7 293 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 SLC6A18Q96N87 628 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 DEPDC7Q96QD5 511 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 NAP1L4Q99733 375 aaKnown RBP10.04□□□□□ -0.8
NEDD1-211ENST00000557454 HAPLN2Q9GZV7 340 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 NCOA5Q9HCD5 579 aaKnown RBP10.04□□□□□ -0.8
NEDD1-211ENST00000557454 KCNJ14Q9UNX9 436 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 SATB2Q9UPW6 733 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 MTORP42345 2549 aa10.04□□□□□ -0.8
NEDD1-211ENST00000557454 NEDD8-MDP1E9PL57 170 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 YKT6O15498 198 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 TSPAN3O60637 253 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 SEMA4FO95754 770 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 ABL1P00519 1130 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 WNT1P04628 370 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 ACAT1P24752 427 aaKnown RBP10.03□□□□□ -0.8
NEDD1-211ENST00000557454 RBMS1P29558 406 aaKnown RBP10.03□□□□□ -0.8
NEDD1-211ENST00000557454 TXKP42681 527 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 GRIN1Q05586 938 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 MCL1Q07820 350 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 BNIP3Q12983 259 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 SRSF6Q13247 344 aaKnown RBP10.03□□□□□ -0.8
NEDD1-211ENST00000557454 NCAPHQ15003 741 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 PROX2Q3B8N5 592 aa10.03□□□□□ -0.8
NEDD1-211ENST00000557454 EARS2Q5JPH6 523 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms