RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 SHANK1Q9Y566 2161 aa13□□□□□ -0.33
ABCD4-226ENST00000556971 MYH10P35580 1976 aa13□□□□□ -0.33
ABCD4-226ENST00000556971 DGAT1O75907 488 aa13□□□□□ -0.33
ABCD4-226ENST00000556971 MLLT3P42568 568 aaPredicted RBP13□□□□□ -0.33
ABCD4-226ENST00000556971 ZNF211Q13398 564 aaPredicted RBP13□□□□□ -0.33
ABCD4-226ENST00000556971 CTTNQ14247 550 aaKnown RBP13□□□□□ -0.33
ABCD4-226ENST00000556971 DDR2Q16832 855 aa13□□□□□ -0.33
ABCD4-226ENST00000556971 MB21D2Q8IYB1 491 aaPredicted RBP13□□□□□ -0.33
ABCD4-226ENST00000556971 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
ABCD4-226ENST00000556971 FANCBQ8NB91 859 aa13□□□□□ -0.33
ABCD4-226ENST00000556971 C2orf15Q8WU43 125 aaKnown RBP13□□□□□ -0.33
ABCD4-226ENST00000556971 SKA1Q96BD8 255 aa13□□□□□ -0.33
ABCD4-226ENST00000556971 AASDHPPTQ9NRN7 309 aa13□□□□□ -0.33
ABCD4-226ENST00000556971 E7EWF7 191 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 USO1O60763 962 aaKnown RBP12.99□□□□□ -0.33
ABCD4-226ENST00000556971 PRPF40AO75400 957 aaKnown RBP12.99□□□□□ -0.33
ABCD4-226ENST00000556971 LDLRP01130 860 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 CYP21A2P08686 494 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 LIPCP11150 499 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 COPAP53621 1224 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 FUT2Q10981 343 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 KLRB1Q12918 225 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 TESK1Q15569 626 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 Q4G0T1 1027 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 NT5DC1Q5TFE4 455 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 SPNS3Q6ZMD2 512 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 DHX32Q7L7V1 743 aaKnown RBP12.99□□□□□ -0.33
ABCD4-226ENST00000556971 FSIP1Q8NA03 581 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 WDR36Q8NI36 951 aaKnown RBP12.99□□□□□ -0.33
ABCD4-226ENST00000556971 ARRDC3Q96B67 414 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 TCTN2Q96GX1 697 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 DYDC2Q96IM9 177 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 TRIM9Q9C026 710 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 C2orf40Q9H1Z8 148 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 CDT1Q9H211 546 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 SLKQ9H2G2 1235 aaPredicted RBP12.99□□□□□ -0.33
ABCD4-226ENST00000556971 SEL1LQ9UBV2 794 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 VAV3Q9UKW4 847 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 STAB1Q9NY15 2570 aa12.99□□□□□ -0.33
ABCD4-226ENST00000556971 SH2B2O14492 632 aaPredicted RBP12.98□□□□□ -0.33
ABCD4-226ENST00000556971 NADKO95544 446 aaPredicted RBP12.98□□□□□ -0.33
ABCD4-226ENST00000556971 IGHV4-34P06331 123 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 ODC1P11926 461 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 TGM2P21980 687 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 PDE6CP51160 858 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 PPP2R5CQ13362 524 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 NOLC1Q14978 699 aaKnown RBP eCLIP12.98□□□□□ -0.33
ABCD4-226ENST00000556971 SAFBQ15424 915 aaKnown RBP eCLIP12.98□□□□□ -0.33
ABCD4-226ENST00000556971 LACTB2Q53H82 288 aaPredicted RBP12.98□□□□□ -0.33
ABCD4-226ENST00000556971 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
ABCD4-226ENST00000556971 KIAA1958Q8N8K9 716 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 BSNDQ8WZ55 320 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 LURAP1Q96LR2 239 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 MYRFLQ96LU7 910 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 KIFC3Q9BVG8 833 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 ZMYND12Q9H0C1 365 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 TTC12Q9H892 705 aaPredicted RBP12.98□□□□□ -0.33
ABCD4-226ENST00000556971 DIAPH3Q9NSV4 1193 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 SEPT10Q9P0V9 454 aa12.98□□□□□ -0.33
ABCD4-226ENST00000556971 PRR19A6NJB7 356 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 CKMT1AP12532 417 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 RXRGP48443 463 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 GUCY2FP51841 1108 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 PDE1AP54750 535 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 NXPH1P58417 271 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 SPAG1Q07617 926 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 ZNF568Q3ZCX4 644 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 CASC1Q6TDU7 716 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 TMEM25Q86YD3 366 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
ABCD4-226ENST00000556971 MDFIQ99750 246 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 ZSWIM4Q9H7M6 989 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 TMLHEQ9NVH6 421 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 ERRFI1Q9UJM3 462 aaPredicted RBP12.97□□□□□ -0.33
ABCD4-226ENST00000556971 PCDHB5Q9Y5E4 795 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 SLC12A7Q9Y666 1083 aa12.97□□□□□ -0.33
ABCD4-226ENST00000556971 PPEF2O14830 753 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 WNT9AO14904 365 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 FFAR2O15552 330 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 SLC7A9P82251 487 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 EIF2S3LQ2VIR3 472 aaKnown RBP12.96□□□□□ -0.33
ABCD4-226ENST00000556971 DEPTORQ8TB45 409 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 GRAMD1AQ96CP6 724 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 SENP8Q96LD8 212 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 NACC1Q96RE7 527 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 SLC12A9Q9BXP2 914 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 BTBD1Q9H0C5 482 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 RNF38Q9H0F5 515 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 LHX5Q9H2C1 402 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 TBC1D14Q9P2M4 693 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 PCDHGA7Q9Y5G6 932 aa12.96□□□□□ -0.33
ABCD4-226ENST00000556971 ARHGEF17Q96PE2 2063 aaPredicted RBP12.96□□□□□ -0.33
ABCD4-226ENST00000556971 CCDC187A0A096LP49 1063 aa12.95□□□□□ -0.34
ABCD4-226ENST00000556971 A0A1W2PPC4 97 aa12.95□□□□□ -0.34
ABCD4-226ENST00000556971 A0A1W2PR77 199 aa12.95□□□□□ -0.34
ABCD4-226ENST00000556971 PRC1O43663 620 aa12.95□□□□□ -0.34
ABCD4-226ENST00000556971 GP1BAP07359 652 aa12.95□□□□□ -0.34
ABCD4-226ENST00000556971 HARSP12081 509 aaKnown RBP12.95□□□□□ -0.34
ABCD4-226ENST00000556971 NR1D1P20393 614 aa12.95□□□□□ -0.34
ABCD4-226ENST00000556971 CD38P28907 300 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms