RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 CYP1B1Q16678 543 aa15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 ALYREFQ86V81 257 aaKnown RBP15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 IFNEQ86WN2 208 aa15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 PCYOX1LQ8NBM8 494 aa15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 B4GALNT2Q8NHY0 566 aa15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 SKA2Q8WVK7 121 aaPredicted RBP15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 TBC1D23Q9NUY8 699 aa15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 ARHGEF38Q9NXL2 777 aa15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 ETAA1Q9NY74 926 aa15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 AP4E1Q9UPM8 1137 aa15.52■□□□□ 0.07
ARHGEF40-207ENST00000556399 SYCE1LA8MT33 242 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 TRDMT1O14717 391 aaKnown RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 HOXA10P31260 410 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 BRSK2Q8IWQ3 736 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 HELQQ8TDG4 1101 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 SIKE1Q9BRV8 207 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 DENND2DQ9H6A0 471 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 TCF7L2Q9NQB0 619 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 WDR27A2RRH5 827 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 GSC2O15499 205 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 CHRNB2P17787 502 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 MAP4P27816 1152 aaKnown RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 RBL1P28749 1068 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 GLRBP48167 497 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 IREB2P48200 963 aaKnown RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 HSD17B4P51659 736 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 FASTKD3Q14CZ7 662 aaKnown RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 C16orf46Q6P387 395 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 CPNE8Q86YQ8 564 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 CYP4X1Q8N118 509 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 IL31RAQ8NI17 732 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 ZBTB18Q99592 522 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 MRGBPQ9NV56 204 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 DPP3Q9NY33 737 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.51■□□□□ 0.077e-7■□□□□ 10.8
ARHGEF40-207ENST00000556399 STX18Q9P2W9 335 aaKnown RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 NOCTQ9UK39 431 aaKnown RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 TRPC5OSA6NMA1 111 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 DCXO43602 365 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 SNX2O60749 519 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 MOCS2O96007 188 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 AVPR1AP37288 418 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 CDH8P55286 799 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 MGAT5Q09328 741 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 STX5Q13190 355 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 OASLQ15646 514 aaKnown RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 ZACNQ401N2 412 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 DACT2Q5SW24 774 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 NPNTQ6UXI9 565 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 KYQ8NBH2 561 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 USP13Q92995 863 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 LRRC40Q9H9A6 602 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 IL1RL2Q9HB29 575 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 PIH1D1Q9NWS0 290 aaKnown RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 PIM2Q9P1W9 311 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 KIAA1257Q9ULG3 409 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 H2AFYO75367 372 aaKnown RBP15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 MTA2O94776 668 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 CXCL8P10145 99 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 C4orf50Q6ZRC1 276 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 NUP93Q8N1F7 819 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 SLC7A14Q8TBB6 771 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 NRDE2Q9H7Z3 1164 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 DMAC2Q9NW81 257 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 SNX13Q9Y5W8 968 aa15.51■□□□□ 0.07
ARHGEF40-207ENST00000556399 TIMM44O43615 452 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 GAS2O43903 313 aaKnown RBP15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 COLGALT1Q8NBJ5 622 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 IFT43Q96FT9 208 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 MFSD14AQ96MC6 490 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 MROH7Q68CQ1 1323 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 PSMD3O43242 534 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 TFE3P19532 575 aaPredicted RBP15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 ADRM1Q16186 407 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 SYNPO2Q9UMS6 1093 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 CHKBQ9Y259 395 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 COL1A1P02452 1464 aaPredicted RBP15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 DPPA5A6NC42 116 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 SOX11P35716 441 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 UGCGQ16739 394 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 PRAMEF18Q5VWM3 479 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 DENND1BQ6P3S1 775 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 TTC33Q6PID6 262 aaPredicted RBP15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 KYAT3Q6YP21 454 aaKnown RBP15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 MYOZ2Q9NPC6 264 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 SIGLEC16A6NMB1 481 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 ABLIM1O14639 778 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 CHADO15335 359 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 MICAL2O94851 1124 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 CYP2C8P10632 490 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 GFAPP14136 432 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 FOXN2P32314 431 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 BBS12Q6ZW61 710 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 APOBEC3FQ8IUX4 373 aaKnown RBP15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 IPMKQ8NFU5 416 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 PIWIL2Q8TC59 973 aaKnown RBP15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 GCNAQ96QF7 691 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 ADNPQ9H2P0 1102 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 SPC25Q9HBM1 224 aa15.5■□□□□ 0.07
ARHGEF40-207ENST00000556399 UBIAD1Q9Y5Z9 338 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms