RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 OTOL1A6NHN0 477 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-215ENST00000555616 LRRC53A6NM62 1247 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 ZDHHC11BP0C7U3 371 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 SP9P0CG40 484 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 CHRNB1P11230 501 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 KRT5P13647 590 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 FERP16591 822 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 HDCP19113 662 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 YWHAQP27348 245 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 SOX5P35711 763 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 JAM2P57087 298 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 RUNX3Q13761 415 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 LRRC32Q14392 662 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 ZNF528Q3MIS6 628 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 SNX30Q5VWJ9 437 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 TRIM68Q6AZZ1 485 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 CC2D1AQ6P1N0 951 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-215ENST00000555616 CLEC20AQ6ZU45 233 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 TC2NQ8N9U0 490 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 SCAMP5Q8TAC9 235 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 OSCP1Q8WVF1 389 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 SHC3Q92529 594 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 TATDN2Q93075 761 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 CHFRQ96EP1 664 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 KREMEN1Q96MU8 473 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 EBF3Q9H4W6 596 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 GKN1Q9NS71 199 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 CISHQ9NSE2 258 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 MYO15AQ9UKN7 3530 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 VPS13AQ96RL7 3174 aa10.15□□□□□ -0.78
ACTN1-215ENST00000555616 GVINP1Q7Z2Y8 2422 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 PRR23AA6NEV1 266 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 HHLA1C9JL84 531 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 LAMTOR5O43504 91 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 BEST1O76090 585 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 ARSAP15289 507 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 ADORA2BP29275 332 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 HNRNPH3P31942 346 aaKnown RBP10.14□□□□□ -0.79
ACTN1-215ENST00000555616 USP8P40818 1118 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 MAP3K7CLP57077 242 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 BPIFB4P59827 614 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 ZXDBP98169 803 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 IFRD2Q12894 506 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-215ENST00000555616 MTAPQ13126 283 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 CCINQ13939 588 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 ARID5BQ14865 1188 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 ASIC2Q16515 512 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 EML3Q32P44 896 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 GPRIN1Q7Z2K8 1008 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 DDX42Q86XP3 938 aaKnown RBP eCLIP10.14□□□□□ -0.79
ACTN1-215ENST00000555616 CPA6Q8N4T0 437 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 UBR7Q8N806 425 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 TTC8Q8TAM2 541 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 NELL1Q92832 810 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 ATP2A3Q93084 1043 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 CYFIP2Q96F07 1278 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 FBXO44Q9H4M3 255 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 DUS2Q9NX74 493 aaKnown RBP10.14□□□□□ -0.79
ACTN1-215ENST00000555616 AIPL1Q9NZN9 384 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 GMIPQ9P107 970 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 AJAP1Q9UKB5 411 aaPredicted RBP10.14□□□□□ -0.79
ACTN1-215ENST00000555616 PCDHB4Q9Y5E5 795 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 BZW2Q9Y6E2 419 aaKnown RBP10.14□□□□□ -0.79
ACTN1-215ENST00000555616 WNT6Q9Y6F9 365 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 USP34Q70CQ2 3546 aa10.14□□□□□ -0.79
ACTN1-215ENST00000555616 HELZP42694 1942 aaKnown RBP10.13□□□□□ -0.79
ACTN1-215ENST00000555616 RNF225M0QZC1 329 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-215ENST00000555616 LEFTY2O00292 366 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 FOXN3O00409 490 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-215ENST00000555616 COCHO43405 550 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 GFRA3O60609 400 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 GFPT2O94808 682 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 PAPSS2O95340 614 aaPredicted RBP10.13□□□□□ -0.79
ACTN1-215ENST00000555616 SERPING1P05155 500 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 TDGF1P13385 188 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 IFNAR2P48551 515 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 RAD23BP54727 409 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 CDK17Q00537 523 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 ARID5AQ03989 594 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 GOLGA8FQ08AF8 430 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 GOLGA8DPQ0D2H9 430 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 KLHL30Q0D2K2 578 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 TDRD12Q587J7 1177 aaKnown RBP10.13□□□□□ -0.79
ACTN1-215ENST00000555616 TMEM196Q5HYL7 178 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 DGKKQ5KSL6 1271 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 ARHGAP17Q68EM7 881 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 ZC3H14Q6PJT7 736 aaKnown RBP10.13□□□□□ -0.79
ACTN1-215ENST00000555616 TMEM270Q6UE05 265 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 Q6ZS52 159 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 VPS36Q86VN1 386 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 TMTC1Q8IUR5 882 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 LRRC8AQ8IWT6 810 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 FAM71AQ8IYT1 594 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 SYNPOQ8N3V7 929 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 SPEM1Q8N4L4 309 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 SLC4A11Q8NBS3 891 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 KAT5Q92993 513 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 TMEM176AQ96HP8 235 aa10.13□□□□□ -0.79
ACTN1-215ENST00000555616 ZFRQ96KR1 1074 aaKnown RBP10.13□□□□□ -0.79
ACTN1-215ENST00000555616 BAG1Q99933 345 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms