RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 FOXN3O00409 490 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 TRDMT1O14717 391 aaKnown RBP13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 GREM1O60565 184 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 LETM1O95202 739 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 SP9P0CG40 484 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 HOXC13P31276 330 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 SLC6A11P48066 632 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CSTF1Q05048 431 aaKnown RBP13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 DHCR24Q15392 516 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 GAB4Q2WGN9 574 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 TMEM196Q5HYL7 178 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 PM20D1Q6GTS8 502 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 FSTL4Q6MZW2 842 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 DENND1BQ6P3S1 775 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 Q6ZS52 159 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 BHLHA9Q7RTU4 235 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CPA6Q8N4T0 437 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 ZNF606Q8WXB4 792 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 ATP2A3Q93084 1043 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 MFRPQ9BY79 579 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 VPS16Q9H269 839 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 LRRC4Q9HBW1 653 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 ANO10Q9NW15 660 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 C2orf42Q9NWW7 574 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 APEX2Q9UBZ4 518 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 DNMT3LQ9UJW3 386 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 SH3BP1Q9Y3L3 701 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 OBSL1O75147 1896 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 TICRRQ7Z2Z1 1910 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CACNA1IQ9P0X4 2223 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 VPS13AQ96RL7 3174 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CACNA1HO95180 2353 aa13.05□□□□□ -0.32
TRAPPC6B-205ENST00000555269 NUP210Q8TEM1 1887 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 MYH10P35580 1976 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 E2F8A0AVK6 867 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 M0QYV0 167 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 LAMTOR5O43504 91 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 EGFP01133 1207 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 HMBSP08397 361 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 PNMA6AP0CW24 399 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 RALAP11233 206 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 PLA2G4AP47712 749 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 YWHAGP61981 247 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 ADIGQ0VDE8 80 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 EFEMP1Q12805 493 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 NR1H3Q13133 447 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 STX1AQ16623 288 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CDKAL1Q5VV42 579 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CAVIN1Q6NZI2 390 aaKnown RBP13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 ALYREFQ86V81 257 aaKnown RBP13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 DDX42Q86XP3 938 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 TMEM25Q86YD3 366 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 MIB1Q86YT6 1006 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 BBS7Q8IWZ6 715 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CLEC4CQ8WTT0 213 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 KCTD13Q8WZ19 329 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 EDEM1Q92611 657 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 MSANTD3Q96H12 275 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 P2RY13Q9BPV8 354 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CHRDQ9H2X0 955 aa13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 POLR3BQ9NW08 1133 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC6B-205ENST00000555269 COL4A2P08572 1712 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 YJEFN3A6XGL0 299 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 E7ENQ6 273 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 SLC9A3R1O14745 358 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 THAP12O43422 761 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 NFATC1O95644 943 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 KLKB1P03952 638 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CYP17A1P05093 508 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 SETSIPP0DME0 302 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 EEF1GP26641 437 aaKnown RBP13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 GPD2P43304 727 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 KLK7P49862 253 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 TYRO3Q06418 890 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 MESP2Q0VG99 397 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 GRSF1Q12849 480 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CCINQ13939 588 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 KRT31Q15323 416 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 DGKKQ5KSL6 1271 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 LY6G5CQ5SRR4 150 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 KLHDC7AQ5VTJ3 777 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 BSPRYQ5W0U4 402 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 PKN3Q6P5Z2 889 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 C1orf228Q6PIY5 440 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 HTR3DQ70Z44 454 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 ENOSF1Q7L5Y1 443 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 SFTPA1Q8IWL2 248 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 SCUBE3Q8IX30 993 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 ZNF276Q8N554 614 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 NAT16Q8N8M0 369 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 SHC3Q92529 594 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 EZH1Q92800 747 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 MIS12Q9H081 205 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CLIC5Q9NZA1 410 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 TBC1D14Q9P2M4 693 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CYTH4Q9UIA0 394 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 R4GN57 208 aa13.03□□□□□ -0.32
TRAPPC6B-205ENST00000555269 CLCN1P35523 988 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms