RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 PCDHA3Q9Y5H8 950 aa18.46■□□□□ 0.55
PSEN1-212ENST00000555254 CDY1Q9Y6F8 540 aa18.46■□□□□ 0.55
PSEN1-212ENST00000555254 CTAGE15A4D2H0 777 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 TRIM66O15016 1216 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 MBTPS2O43462 519 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 BEST1O76090 585 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 GLI1P08151 1106 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 CTAGE8P0CG41 777 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 HOXB8P17481 243 aaPredicted RBP18.45■□□□□ 0.54
PSEN1-212ENST00000555254 CXCR5P32302 372 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 MAGEA11P43364 429 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 CDR1P51861 262 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 RWDD2BP57060 319 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 TUBB4BP68371 445 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 GPR17Q13304 367 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 SMAD4Q13485 552 aaKnown RBP18.45■□□□□ 0.54
PSEN1-212ENST00000555254 CC2D1AQ6P1N0 951 aaPredicted RBP18.45■□□□□ 0.54
PSEN1-212ENST00000555254 OLFML1Q6UWY5 402 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 RSPO2Q6UXX9 243 aaPredicted RBP18.45■□□□□ 0.54
PSEN1-212ENST00000555254 TMC5Q6UXY8 1006 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 SLC26A9Q7LBE3 791 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 CTAGE6Q86UF2 777 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 CTAGE4Q8IX94 777 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 NIPA2Q8N8Q9 360 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 JOSD2Q8TAC2 188 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 SPPL2BQ8TCT7 592 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 RXFP2Q8WXD0 754 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 TRIM62Q9BVG3 475 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 CNGB3Q9NQW8 809 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 MAN1C1Q9NR34 630 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 MTRRQ9UBK8 725 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 USP15Q9Y4E8 981 aaPredicted RBP18.45■□□□□ 0.54
PSEN1-212ENST00000555254 ATG2AQ2TAZ0 1938 aa18.45■□□□□ 0.54
PSEN1-212ENST00000555254 DDX3YO15523 660 aaKnown RBP18.44■□□□□ 0.54
PSEN1-212ENST00000555254 HSF2BPO75031 334 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 CYP2F1P24903 491 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 SDC4P31431 198 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 CTNNA1P35221 906 aaKnown RBP18.44■□□□□ 0.54
PSEN1-212ENST00000555254 ZNF143P52747 638 aaPredicted RBP18.44■□□□□ 0.54
PSEN1-212ENST00000555254 ZFYVE27Q5T4F4 411 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 SEL1L2Q5TEA6 688 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 CES5AQ6NT32 575 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 ELMSAN1Q6PJG2 1045 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 ARCQ7LC44 396 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 SMRP1Q8NCR6 262 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 FAM149B1Q96BN6 582 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 RPGRIP1Q96KN7 1286 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 C8orf48Q96LL4 319 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 KCNK16Q96T55 309 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 NAP1L3Q99457 506 aaPredicted RBP18.44■□□□□ 0.54
PSEN1-212ENST00000555254 S1PR5Q9H228 398 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.44■□□□□ 0.54
PSEN1-212ENST00000555254 DPP7Q9UHL4 492 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 TMEM59LQ9UK28 342 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 XIRP2A4UGR9 3374 aa18.44■□□□□ 0.54
PSEN1-212ENST00000555254 C2CD4BA6NLJ0 364 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 F8VP50 259 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 DPYSL4O14531 572 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 ZNF185O15231 689 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 PSTPIP1O43586 416 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 TBC1D4O60343 1298 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 GRAP2O75791 330 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 GABBR2O75899 941 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 ZBED1O96006 694 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 RPL10AP62906 217 aaKnown RBP18.43■□□□□ 0.54
PSEN1-212ENST00000555254 LRRC38Q5VT99 294 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 EMC1Q8N766 993 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 KREMEN2Q8NCW0 462 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 ZMIZ2Q8NF64 920 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 COG1Q8WTW3 980 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 IRGQQ8WZA9 623 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 RHOBTB2Q9BYZ6 727 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 ULBP1Q9BZM6 244 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 CARD9Q9H257 536 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 CDH22Q9UJ99 828 aa18.43■□□□□ 0.54
PSEN1-212ENST00000555254 CAPN9O14815 690 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 TERF1P54274 439 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 YWHAZP63104 245 aaKnown RBP18.42■□□□□ 0.54
PSEN1-212ENST00000555254 OGDHQ02218 1023 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 RAB33AQ14088 237 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 SMAD2Q15796 467 aaKnown RBP18.42■□□□□ 0.54
PSEN1-212ENST00000555254 RAB41Q5JT25 222 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 LILRA6Q6PI73 481 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 MYRIPQ8NFW9 859 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 CD101Q93033 1021 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 PGLYRP2Q96PD5 576 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 ADAM7Q9H2U9 754 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 EPHX3Q9H6B9 360 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 SFXN1Q9H9B4 322 aa18.42■□□□□ 0.54
PSEN1-212ENST00000555254 DDX56Q9NY93 547 aaKnown RBP18.42■□□□□ 0.54
PSEN1-212ENST00000555254 MYH10P35580 1976 aa18.41■□□□□ 0.54
PSEN1-212ENST00000555254 CCDC195A0A1B0GUA6 201 aa18.41■□□□□ 0.54
PSEN1-212ENST00000555254 HHLA1C9JL84 531 aa18.41■□□□□ 0.54
PSEN1-212ENST00000555254 PGRMC1O00264 195 aaKnown RBP18.41■□□□□ 0.54
PSEN1-212ENST00000555254 DAB1O75553 588 aa18.41■□□□□ 0.54
PSEN1-212ENST00000555254 RFPL2O75678 378 aa18.41■□□□□ 0.54
PSEN1-212ENST00000555254 KRT7P08729 469 aa18.41■□□□□ 0.54
PSEN1-212ENST00000555254 USP17L7P0C7H9 530 aa18.41■□□□□ 0.54
PSEN1-212ENST00000555254 TUFMP49411 452 aaKnown RBP18.41■□□□□ 0.54
PSEN1-212ENST00000555254 PEX5P50542 639 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms