RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 COPS6Q7L5N1 327 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 ERC1Q8IUD2 1116 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 CLASRPQ8N2M8 674 aaKnown RBP5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 CHCHD4Q8N4Q1 142 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 ZNF808Q8N4W9 903 aaPredicted RBP5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 FITM2Q8N6M3 262 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 OR52N2Q8NGI0 321 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 TBC1D15Q8TC07 691 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 RSPH1Q8WYR4 309 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 MRGPRX1Q96LB2 322 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 P2RX7Q99572 595 aaKnown RBP5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 UPF3BQ9BZI7 483 aaKnown RBP5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 NUP62CLQ9H1M0 184 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 PIH1D1Q9NWS0 290 aaKnown RBP5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 SAGE1Q9NXZ1 904 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 JKAMPQ9P055 326 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 CFAP97Q9P2B7 532 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 HACL1Q9UJ83 578 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 PCDHGB3Q9Y5G1 929 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 ADAMTSL1Q8N6G6 1762 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 ABCC12Q96J65 1359 aa5.8□□□□□ -1.48
MTHFD1-206ENST00000554353 LTBP1Q14766 1721 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 COL4A5P29400 1685 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 PRSS47A8MTI9 375 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 PATE3B3GLJ2 98 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 ZNF623O75123 536 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 AGFG2O95081 481 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 BRAFP15056 766 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 HOXA5P20719 270 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 ACO1P21399 889 aaKnown RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 MGAT1P26572 445 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 RENBPP51606 427 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 CHN2P52757 468 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 TRIM14Q14142 442 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 NECTIN1Q15223 517 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 RABL6Q3YEC7 729 aaPredicted RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 CWC27Q6UX04 472 aaKnown RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 ZNF365Q70YC5 407 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 RUFY3Q7L099 469 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 AACSQ86V21 672 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 ZNF34Q8IZ26 560 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 GPC2Q8N158 579 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 NKAPQ8N5F7 415 aaKnown RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 Q8TCH9 128 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 GPT2Q8TD30 523 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 APIPQ96GX9 242 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 RBM17Q96I25 401 aaKnown RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 MYCBPQ99417 103 aaPredicted RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 TBCBQ99426 244 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 BDH2Q9BUT1 245 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 SSBP3Q9BWW4 388 aaPredicted RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 KIAA1586Q9HCI6 787 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 RRAGDQ9NQL2 400 aaPredicted RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 ZDHHC8Q9ULC8 765 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 OGDHLQ9ULD0 1010 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 CORO2BQ9UQ03 480 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 SLC45A1Q9Y2W3 748 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 SNX13Q9Y5W8 968 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 DGKBQ9Y6T7 804 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 DDX49Q9Y6V7 483 aaKnown RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 CNTNAP1P78357 1384 aa5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 RPAP1Q9BWH6 1393 aaPredicted RBP5.79□□□□□ -1.48
MTHFD1-206ENST00000554353 BRCA2P51587 3418 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 A0A0G2JLL6 359 aaPredicted RBP5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 DRGXA6NNA5 263 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 ZNF785A8K8V0 405 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 NTSR2O95665 410 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 ITGB3P05106 788 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 RARBP10826 455 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 ZKSCAN1P17029 563 aaPredicted RBP5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 HIBADHP31937 336 aaKnown RBP5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 TM4SF4P48230 202 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 G3BP1Q13283 466 aaKnown RBP eCLIP5.78□□□□□ -1.485e-10■■□□□ 13.8
MTHFD1-206ENST00000554353 KIF22Q14807 665 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 TAF11Q15544 211 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 ADCK5Q3MIX3 580 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 HS1BP3Q53T59 392 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 DRICH1Q6PGQ1 229 aaPredicted RBP5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 MAATS1Q7Z4T9 603 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 SLC17A8Q8NDX2 589 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 SNED1Q8TER0 1413 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 RUFY2Q8WXA3 655 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 ANKS1AQ92625 1134 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 FAM89AQ96GI7 184 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 LOXL4Q96JB6 756 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 SGCZQ96LD1 299 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 CRAMP1Q96RY5 1269 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 GPR87Q9BY21 358 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 TM6SF1Q9BZW5 370 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 ZNF287Q9HBT7 754 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 CPNE7Q9UBL6 633 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 LAMA4Q16363 1823 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 MED23Q9ULK4 1368 aa5.78□□□□□ -1.48
MTHFD1-206ENST00000554353 CCDC171Q6TFL3 1326 aa5.77□□□□□ -1.49
MTHFD1-206ENST00000554353 MKI67P46013 3256 aaKnown RBP5.77□□□□□ -1.49
MTHFD1-206ENST00000554353 DDX60Q8IY21 1712 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms