RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 DDX23Q9BUQ8 820 aaKnown RBP8.65□□□□□ -1.02
RDH11-205ENST00000553816 FAM124BQ9H5Z6 455 aaPredicted RBP8.65□□□□□ -1.02
RDH11-205ENST00000553816 TBC1D17Q9HA65 648 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 HPS4Q9NQG7 708 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 GKN1Q9NS71 199 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 OBP2AQ9NY56 170 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 APEX2Q9UBZ4 518 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 NUDT5Q9UKK9 219 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 CNTN6Q9UQ52 1028 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 USP3Q9Y6I4 520 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 CUL9Q8IWT3 2517 aa8.65□□□□□ -1.02
RDH11-205ENST00000553816 ATG2BQ96BY7 2078 aa8.65□□□□□ -1.03
RDH11-205ENST00000553816 SYCE3A1L190 88 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 GTPBP10A4D1E9 387 aaKnown RBP8.64□□□□□ -1.03
RDH11-205ENST00000553816 SOBPA7XYQ1 873 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 PIK3R2O00459 728 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 PES1O00541 588 aaKnown RBP8.64□□□□□ -1.03
RDH11-205ENST00000553816 MDM4O15151 490 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 TBX18O95935 607 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 DCNP07585 359 aaKnown RBP8.64□□□□□ -1.03
RDH11-205ENST00000553816 PAEPP09466 180 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 ATP1A3P13637 1013 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 KRT5P13647 590 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 GLULP15104 373 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 ARSAP15289 507 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 ZNF18P17022 549 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 AOC1P19801 751 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 TARSP26639 723 aaKnown RBP8.64□□□□□ -1.03
RDH11-205ENST00000553816 EEF1GP26641 437 aaKnown RBP8.64□□□□□ -1.03
RDH11-205ENST00000553816 COPB1P53618 953 aaKnown RBP8.64□□□□□ -1.03
RDH11-205ENST00000553816 SLC7A9P82251 487 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 MYL5Q02045 173 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 USP4Q13107 963 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 FZD5Q13467 585 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 ZNF268Q14587 947 aaPredicted RBP8.64□□□□□ -1.03
RDH11-205ENST00000553816 MTF1Q14872 753 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 CNGA2Q16280 664 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 ARHGAP29Q52LW3 1261 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 RAB41Q5JT25 222 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 LCLAT1Q6UWP7 414 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 TPRG1Q6ZUI0 275 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 BHLHA9Q7RTU4 235 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 SCD5Q86SK9 330 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 SUGP1Q8IWZ8 645 aaKnown RBP8.64□□□□□ -1.03
RDH11-205ENST00000553816 DHX40Q8IX18 779 aaKnown RBP8.64□□□□□ -1.03
RDH11-205ENST00000553816 YAF2Q8IY57 180 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 SH3RF2Q8TEC5 729 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 SLC35F5Q8WV83 523 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 OVCA2Q8WZ82 227 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 DNASE1L2Q92874 299 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 IRF7Q92985 503 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 E2F7Q96AV8 911 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 LINC00597Q9H2U6 94 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 MFSD1Q9H3U5 465 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 EBF3Q9H4W6 596 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 SLC24A3Q9HC58 644 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 PNPLA8Q9NP80 782 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 LTB4R2Q9NPC1 389 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 COMMD8Q9NX08 183 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 SMPD4Q9NXE4 827 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 EHD2Q9NZN4 543 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 ZMYM5Q9UJ78 669 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 DNAJC12Q9UKB3 198 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 ARHGAP26Q9UNA1 814 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.64□□□□□ -1.037e-6■■□□□ 11.9
RDH11-205ENST00000553816 SCML2Q9UQR0 700 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 FHOD1Q9Y613 1164 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 CPQQ9Y646 472 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 WNT6Q9Y6F9 365 aa8.64□□□□□ -1.03
RDH11-205ENST00000553816 USP34Q70CQ2 3546 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 KANSL1LA0AUZ9 987 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 LEFTY2O00292 366 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 FOXN3O00409 490 aaPredicted RBP8.63□□□□□ -1.03
RDH11-205ENST00000553816 XPO1O14980 1071 aaKnown RBP8.63□□□□□ -1.03
RDH11-205ENST00000553816 EPHB6O15197 1021 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 TLR5O60602 858 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 MBL2P11226 248 aaPredicted RBP8.63□□□□□ -1.03
RDH11-205ENST00000553816 TCF3P15923 654 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 TRIM21P19474 475 aaKnown RBP8.63□□□□□ -1.03
RDH11-205ENST00000553816 CLCN1P35523 988 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 PLA2G4AP47712 749 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 PPP3CCP48454 512 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 RGS7P49802 495 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 CLCN5P51795 746 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 TKTL1P51854 596 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 BCAT1P54687 386 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 PFKPQ01813 784 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 PRKCQQ04759 706 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 BST2Q10589 180 aaKnown RBP8.63□□□□□ -1.03
RDH11-205ENST00000553816 EML3Q32P44 896 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 HECTD3Q5T447 861 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 KLHDC7AQ5VTJ3 777 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 NAIF1Q69YI7 327 aaPredicted RBP8.63□□□□□ -1.03
RDH11-205ENST00000553816 PMF1Q6P1K2 205 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 TXNDC11Q6PKC3 985 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 CCDC186Q7Z3E2 898 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 TRIM46Q7Z4K8 759 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 CCDC105Q8IYK2 499 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 PDZD8Q8NEN9 1154 aa8.63□□□□□ -1.03
RDH11-205ENST00000553816 PRSS33Q8NF86 280 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms