RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 SERINC5Q86VE9 423 aa16■□□□□ 0.15
ABCD4-218ENST00000553486 RELL1Q8IUW5 271 aa16■□□□□ 0.15
ABCD4-218ENST00000553486 SCUBE3Q8IX30 993 aa16■□□□□ 0.15
ABCD4-218ENST00000553486 ZCCHC9Q8N567 271 aaKnown RBP16■□□□□ 0.15
ABCD4-218ENST00000553486 PIWIL1Q96J94 861 aaKnown RBP16■□□□□ 0.15
ABCD4-218ENST00000553486 HSFY1Q96LI6 401 aa16■□□□□ 0.15
ABCD4-218ENST00000553486 CALN1Q9BXU9 219 aa16■□□□□ 0.15
ABCD4-218ENST00000553486 FAM105AQ9NUU6 356 aa16■□□□□ 0.15
ABCD4-218ENST00000553486 PRDM4Q9UKN5 801 aa16■□□□□ 0.15
ABCD4-218ENST00000553486 TPX2Q9ULW0 747 aaKnown RBP16■□□□□ 0.15
ABCD4-218ENST00000553486 PTGESO14684 152 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 GPR182O15218 404 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 AGTP01019 485 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 CD48P09326 243 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 CCDC130P13994 396 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 LMO2P25791 158 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 RPL34P49207 117 aaKnown RBP15.99■□□□□ 0.15
ABCD4-218ENST00000553486 CDH6P55285 790 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 GPS1Q13098 491 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 TFDP2Q14188 446 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 PDK2Q15119 407 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 CDO1Q16878 200 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 SH3PXD2AQ5TCZ1 1133 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 ARCQ7LC44 396 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 PCGF5Q86SE9 256 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 TEKT4Q8WW24 435 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 PEBP4Q96S96 227 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 TBCBQ99426 244 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 TMEM121Q9BTD3 319 aa15.99■□□□□ 0.15
ABCD4-218ENST00000553486 CNOT10Q9H9A5 744 aaKnown RBP15.99■□□□□ 0.15
ABCD4-218ENST00000553486 SRRM3A6NNA2 597 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-218ENST00000553486 CYB561D2O14569 222 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 SLC8A3P57103 927 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 ATP11AP98196 1134 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 KRT81Q14533 505 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 MORF4L2Q15014 288 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 TAF5Q15542 800 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 ZNF618Q5T7W0 954 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 TTC19Q6DKK2 380 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-218ENST00000553486 PRUNE1Q86TP1 453 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 UHMK1Q8TAS1 419 aaKnown RBP15.98■□□□□ 0.15
ABCD4-218ENST00000553486 FAM172AQ8WUF8 416 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 RSAD2Q8WXG1 361 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 KHSRPQ92945 711 aaKnown RBP eCLIP15.98■□□□□ 0.15
ABCD4-218ENST00000553486 CFAP57Q96MR6 1250 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 LPIN3Q9BQK8 851 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 DDX23Q9BUQ8 820 aaKnown RBP15.98■□□□□ 0.15
ABCD4-218ENST00000553486 ZMYND15Q9H091 742 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 ADAM7Q9H2U9 754 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.98■□□□□ 0.15
ABCD4-218ENST00000553486 MCF2LO15068 1137 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 HCRTO43612 131 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 ACSL3O95573 720 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 CHRNA1P02708 482 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 ZSCAN5DPP0CG00 497 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 ETS1P14921 441 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 PTPN9P43378 593 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 GUCY1A3Q02108 690 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 CCDC85BQ15834 202 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-218ENST00000553486 SCYL2Q6P3W7 929 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 SLC26A9Q7LBE3 791 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 GLIS1Q8NBF1 620 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 B3GALNT2Q8NCR0 500 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 SLC2A14Q8TDB8 520 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 ATXN2LQ8WWM7 1075 aaKnown RBP15.98■□□□□ 0.15
ABCD4-218ENST00000553486 SLC9A7Q96T83 725 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 TSPYL2Q9H2G4 693 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-218ENST00000553486 LRRC4CQ9HCJ2 640 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 NGRNQ9NPE2 291 aaKnown RBP15.98■□□□□ 0.15
ABCD4-218ENST00000553486 THEGQ9P2T0 379 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 GIT1Q9Y2X7 761 aa15.98■□□□□ 0.15
ABCD4-218ENST00000553486 SMIM23A6NLE4 172 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 GABBR2O75899 941 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 IFNB1P01574 187 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 THP07101 528 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 CA3P07451 260 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 CTSHP09668 335 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 LSP1P33241 339 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 EIF3EP60228 445 aaKnown RBP15.97■□□□□ 0.15
ABCD4-218ENST00000553486 MGAT3Q09327 533 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 DPYSL3Q14195 570 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 KYNUQ16719 465 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 UBAP2Q5T6F2 1119 aaKnown RBP15.97■□□□□ 0.15
ABCD4-218ENST00000553486 CYP4V2Q6ZWL3 525 aaPredicted RBP15.97■□□□□ 0.15
ABCD4-218ENST00000553486 OSTM1Q86WC4 334 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 VSIG1Q86XK7 387 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 PHOSPHO2Q8TCD6 241 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 BCAS4Q8TDM0 211 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.97■□□□□ 0.15
ABCD4-218ENST00000553486 ZFP42Q96MM3 310 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 SERPINB12Q96P63 405 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 HNRNPABQ99729 332 aaKnown RBP15.97■□□□□ 0.15
ABCD4-218ENST00000553486 CCDC77Q9BR77 488 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 B3GNT5Q9BYG0 378 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 DNAJC17Q9NVM6 304 aaKnown RBP15.97■□□□□ 0.15
ABCD4-218ENST00000553486 NINJ2Q9NZG7 142 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 SLC12A6Q9UHW9 1150 aa15.97■□□□□ 0.15
ABCD4-218ENST00000553486 XPO1O14980 1071 aaKnown RBP15.96■□□□□ 0.15
ABCD4-218ENST00000553486 LCP1P13796 627 aa15.96■□□□□ 0.15
ABCD4-218ENST00000553486 ATP5DP30049 168 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms