RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 DSEQ9UL01 958 aa14.38□□□□□ -0.11
SNRPF-203ENST00000551316 L1RE1Q9UN81 338 aa14.38□□□□□ -0.11
SNRPF-203ENST00000551316 PDZD2O15018 2839 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 SFI1A8K8P3 1242 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 ZBTB24O43167 697 aaPredicted RBP14.37□□□□□ -0.11
SNRPF-203ENST00000551316 NEMFO60524 1076 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 EPHA8P29322 1005 aaPredicted RBP14.37□□□□□ -0.11
SNRPF-203ENST00000551316 KANSL1Q7Z3B3 1105 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 TMPRSS6Q8IU80 811 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 TRIM22Q8IYM9 498 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 PDCL2Q8N4E4 241 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 FAM212AQ96EL1 285 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 DRC1Q96MC2 740 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 SLC6A18Q96N87 628 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 CCSER1Q9C0I3 900 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 RPF1Q9H9Y2 349 aaKnown RBP14.37□□□□□ -0.11
SNRPF-203ENST00000551316 ABCB6Q9NP58 842 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 TMEM30AQ9NV96 361 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 LRRK1Q38SD2 2015 aa14.37□□□□□ -0.11
SNRPF-203ENST00000551316 AKAP9Q99996 3911 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 NEDD8-MDP1E9PL57 170 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 LAD1O00515 517 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 WNT9AO14904 365 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 CACNG3O60359 315 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 ATP2C2O75185 946 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 MBL2P11226 248 aaPredicted RBP14.36□□□□□ -0.11
SNRPF-203ENST00000551316 PRKCHP24723 683 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 TAF6P49848 677 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 TSPY1Q01534 308 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 BNIP3Q12983 259 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 CLN3Q13286 438 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 TEAD4Q15561 434 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 NFE2Q16621 373 aaPredicted RBP14.36□□□□□ -0.11
SNRPF-203ENST00000551316 RNF20Q5VTR2 975 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 BTBD8Q5XKL5 378 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 SDE2Q6IQ49 451 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 CACTIN-AS1Q8N1I8 211 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 SIPA1Q96FS4 1042 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 JAKMIP1Q96N16 626 aaKnown RBP14.36□□□□□ -0.11
SNRPF-203ENST00000551316 ELF4Q99607 663 aaPredicted RBP14.36□□□□□ -0.11
SNRPF-203ENST00000551316 DPH1Q9BZG8 443 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 OSGEPQ9NPF4 335 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 TRPM5Q9NZQ8 1165 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 DOCK9Q9BZ29 2069 aa14.36□□□□□ -0.11
SNRPF-203ENST00000551316 CLDN3O15551 220 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 USP12O75317 370 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 ITGB2P05107 769 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 ITGAVP06756 1048 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 CISD3P0C7P0 127 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 MAPTP10636 758 aaKnown RBP14.35□□□□□ -0.11
SNRPF-203ENST00000551316 IRF1P10914 325 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 CDK4P11802 303 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 RPA1P27694 616 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 CACNA2D1P54289 1103 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 FOXK1P85037 733 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 ST3GAL1Q11201 340 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 CFAP221Q4G0U5 840 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 SFMBT2Q5VUG0 894 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 CCDC81Q6ZN84 652 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 KIAA1958Q8N8K9 716 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 TMEM161BQ8NDZ6 487 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 NAP1L4Q99733 375 aaKnown RBP14.35□□□□□ -0.11
SNRPF-203ENST00000551316 TTLL2Q9BWV7 592 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 EBF2Q9HAK2 575 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 DDX43Q9NXZ2 648 aaKnown RBP14.35□□□□□ -0.11
SNRPF-203ENST00000551316 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
SNRPF-203ENST00000551316 PCDHB6Q9Y5E3 794 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 F8P00451 2351 aa14.35□□□□□ -0.11
SNRPF-203ENST00000551316 XPOTO43592 962 aaKnown RBP14.34□□□□□ -0.11
SNRPF-203ENST00000551316 GREM1O60565 184 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 TSPAN3O60637 253 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 FSBPO95073 299 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 ABL1P00519 1130 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 IGHV4-34P06331 123 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 MATR3P43243 847 aaKnown RBP eCLIP14.34□□□□□ -0.11
SNRPF-203ENST00000551316 WNT7BP56706 349 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 EVCP57679 992 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 ERVPABLB-1P60509 514 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 PSMC1P62191 440 aaKnown RBP14.34□□□□□ -0.11
SNRPF-203ENST00000551316 ENPP2Q13822 863 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 TOB2Q14106 344 aaPredicted RBP14.34□□□□□ -0.11
SNRPF-203ENST00000551316 TMEM132DQ14C87 1099 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 SKIDA1Q1XH10 827 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 PROX2Q3B8N5 592 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 ARL13BQ3SXY8 428 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 CDCP2Q5VXM1 449 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 SCFD1Q8WVM8 642 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 BHMTQ93088 406 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 MYLPFQ96A32 169 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 LIN37Q96GY3 246 aaPredicted RBP14.34□□□□□ -0.11
SNRPF-203ENST00000551316 NUP58Q9BVL2 599 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 PLEKHB1Q9UF11 243 aaPredicted RBP14.34□□□□□ -0.11
SNRPF-203ENST00000551316 ADAMTS1Q9UHI8 967 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 CSMD2Q7Z408 3487 aa14.34□□□□□ -0.11
SNRPF-203ENST00000551316 KPNA7A9QM74 516 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 GFRA2O00451 464 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 COCHO43405 550 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 TYRP14679 529 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 ABCB4P21439 1286 aa14.33□□□□□ -0.12
SNRPF-203ENST00000551316 RPS6KB1P23443 525 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms