RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TRMT11Q7Z4G4 463 aaKnown RBP22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 ZNF513Q8N8E2 541 aaPredicted RBP22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 KLF16Q9BXK1 252 aaPredicted RBP22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 NACA2Q9H009 215 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 FAM49BQ9NUQ9 324 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 TMEM74BQ9NUR3 256 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 CIZ1Q9ULV3 898 aaPredicted RBP22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 STARD13Q9Y3M8 1113 aa22.93■■□□□ 1.26
SMARCC2-210ENST00000550519 TRIM24O15164 1050 aa22.92■■□□□ 1.26
SMARCC2-210ENST00000550519 TBX18O95935 607 aa22.92■■□□□ 1.26
SMARCC2-210ENST00000550519 TRIM61Q5EBN2 209 aa22.92■■□□□ 1.26
SMARCC2-210ENST00000550519 C10orf76Q5T2E6 689 aa22.92■■□□□ 1.26
SMARCC2-210ENST00000550519 SPOPLQ6IQ16 392 aa22.92■■□□□ 1.26
SMARCC2-210ENST00000550519 NUDT18Q6ZVK8 323 aa22.92■■□□□ 1.26
SMARCC2-210ENST00000550519 SYT12Q8IV01 421 aa22.92■■□□□ 1.26
SMARCC2-210ENST00000550519 PGBD3Q8N328 593 aa22.92■■□□□ 1.26
SMARCC2-210ENST00000550519 HNRNPABQ99729 332 aaKnown RBP22.92■■□□□ 1.26
SMARCC2-210ENST00000550519 CYLDQ9NQC7 956 aa22.92■■□□□ 1.26
SMARCC2-210ENST00000550519 SCML2Q9UQR0 700 aa22.92■■□□□ 1.26
SMARCC2-210ENST00000550519 HHLA1C9JL84 531 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 HLA-DRAP01903 254 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 FAM200BP0CF97 657 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 CEACAM1P13688 526 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 INCA1Q0VD86 236 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 LMAN2Q12907 356 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 CLEC20AQ6ZU45 233 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 ARMCX6Q7L4S7 300 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 GPRIN1Q7Z2K8 1008 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 MIB1Q86YT6 1006 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 TWNKQ96RR1 684 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 OSER1Q9NX31 292 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 TRAF3IP3Q9Y228 551 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 GON4LQ3T8J9 2241 aa22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 MYO18AQ92614 2054 aaKnown RBP22.91■■□□□ 1.26
SMARCC2-210ENST00000550519 MAPK13O15264 365 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 MYL1P05976 194 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 HSP90AA1P07900 732 aaKnown RBP22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 GABRG2P18507 467 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 ADORA2BP29275 332 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 NTSR1P30989 418 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 ATP5C1P36542 298 aaKnown RBP22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 PIK3CAP42336 1068 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 ZNF252P-AS1Q0IIN9 211 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 PEAR1Q5VY43 1037 aaPredicted RBP22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 LYSMD4Q5XG99 296 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 CEP135Q66GS9 1140 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 HSCBQ8IWL3 235 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 NUSAP1Q9BXS6 441 aaKnown RBP22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 MARK1Q9P0L2 795 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 USP25Q9UHP3 1055 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 WASF3Q9UPY6 502 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 FRMD4BQ9Y2L6 1034 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 FRYQ5TBA9 3013 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 CHD6Q8TD26 2715 aa22.9■■□□□ 1.26
SMARCC2-210ENST00000550519 A0A1B0GVL5 298 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 A0A1W2PQF6 199 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 CACNG3O60359 315 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 HOXB2P14652 356 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 PFKFB1P16118 471 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 CMA1P23946 247 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 DPP6P42658 865 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 VAMP7P51809 220 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 GRAMD4Q6IC98 578 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 KLHDC10Q6PID8 442 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 SLC23A3Q6PIS1 610 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 NMUR1Q9HB89 426 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 APOBEC3GQ9HC16 384 aaKnown RBP22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 CD248Q9HCU0 757 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 PNPLA8Q9NP80 782 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 DNAJC17Q9NVM6 304 aaKnown RBP22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 PILRBQ9UKJ0 227 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 HPSEQ9Y251 543 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 ZFHX4Q86UP3 3567 aa22.89■■□□□ 1.25
SMARCC2-210ENST00000550519 CFAP47Q6ZTR5 3102 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 NEDD8-MDP1E9PL57 170 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 CYP26A1O43174 497 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 CALUO43852 315 aaPredicted RBP22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 TYRP14679 529 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 ACO1P21399 889 aaKnown RBP22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 HOXD12P35452 270 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 UAP1L1Q3KQV9 507 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 EGFLAMQ63HQ2 1017 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 CYFIP2Q96F07 1278 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 XPO6Q96QU8 1125 aaKnown RBP22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 ACOX2Q99424 681 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 BBS2Q9BXC9 721 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 CYP3A43Q9HB55 503 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 WDR35Q9P2L0 1181 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 LSM7Q9UK45 103 aaKnown RBP22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 PCDHA5Q9Y5H7 936 aa22.88■■□□□ 1.25
SMARCC2-210ENST00000550519 PLXND1Q9Y4D7 1925 aa22.87■■□□□ 1.25
SMARCC2-210ENST00000550519 AP5Z1O43299 807 aa22.87■■□□□ 1.25
SMARCC2-210ENST00000550519 PROS1P07225 676 aa22.87■■□□□ 1.25
SMARCC2-210ENST00000550519 ENGP17813 658 aa22.87■■□□□ 1.25
SMARCC2-210ENST00000550519 TRIM21P19474 475 aaKnown RBP22.87■■□□□ 1.25
SMARCC2-210ENST00000550519 ITPKAP23677 461 aa22.87■■□□□ 1.25
SMARCC2-210ENST00000550519 WASP42768 502 aa22.87■■□□□ 1.25
SMARCC2-210ENST00000550519 GOLGA8FQ08AF8 430 aa22.87■■□□□ 1.25
SMARCC2-210ENST00000550519 GOLGA8DPQ0D2H9 430 aa22.87■■□□□ 1.25
SMARCC2-210ENST00000550519 NFIL3Q16649 462 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms