RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TMEM25Q86YD3 366 aa24.38■■□□□ 1.49
SMARCD1-209ENST00000550477 CCDC150Q8NCX0 1101 aa24.38■■□□□ 1.49
SMARCD1-209ENST00000550477 PLEKHO2Q8TD55 490 aa24.38■■□□□ 1.49
SMARCD1-209ENST00000550477 SMOQ99835 787 aa24.38■■□□□ 1.49
SMARCD1-209ENST00000550477 CSNK1G1Q9HCP0 422 aa24.38■■□□□ 1.49
SMARCD1-209ENST00000550477 CHD8Q9HCK8 2581 aa24.38■■□□□ 1.49
SMARCD1-209ENST00000550477 ANTXRLA6NF34 631 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 CDX4O14627 284 aaPredicted RBP24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 ADAM23O75077 832 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 ZNF217O75362 1048 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 VNN1O95497 513 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 NR3C1P04150 777 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 HOXB2P14652 356 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 MESP2Q0VG99 397 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 KMT5BQ4FZB7 885 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 SV2AQ7L0J3 742 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 ARMCX6Q7L4S7 300 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 SFTPA1Q8IWL2 248 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 GRAMD1CQ8IYS0 662 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 PHTF2Q8N3S3 785 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 PAGE5Q96GU1 130 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 BBS2Q9BXC9 721 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 DNAJC17Q9NVM6 304 aaKnown RBP24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 STARD13Q9Y3M8 1113 aa24.37■■□□□ 1.49
SMARCD1-209ENST00000550477 CCDC130P13994 396 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 PIK3CAP42336 1068 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 PI4KAP42356 2102 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 RPL6Q02878 288 aaKnown RBP24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 FOXC1Q12948 553 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 MAP7D1Q3KQU3 841 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 SLC23A3Q6PIS1 610 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 CHPFQ8IZ52 775 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 SDCBP2Q9H190 292 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 FAM49BQ9NUQ9 324 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 RCOR1Q9UKL0 485 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 SCML2Q9UQR0 700 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 PCDHA5Q9Y5H7 936 aa24.36■■□□□ 1.49
SMARCD1-209ENST00000550477 NEDD8-MDP1E9PL57 170 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 GIPC1O14908 333 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 KLRC4O43908 158 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 ASS1P00966 412 aaKnown RBP24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 PROS1P07225 676 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 ADORA2BP29275 332 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 RDXP35241 583 aaKnown RBP24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 PTGER3P43115 390 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 PLA2G4AP47712 749 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 PSEN1P49768 467 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 DUOXA1Q1HG43 343 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 HDDC3Q8N4P3 179 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 ZMIZ2Q8NF64 920 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 CYFIP2Q96F07 1278 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 HNRNPABQ99729 332 aaKnown RBP24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 NT5C1AQ9BXI3 368 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 KLF16Q9BXK1 252 aaPredicted RBP24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 KCTD10Q9H3F6 313 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 CYP3A43Q9HB55 503 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 PNPLA8Q9NP80 782 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 ZDHHC4Q9NPG8 344 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 CYLDQ9NQC7 956 aa24.35■■□□□ 1.49
SMARCD1-209ENST00000550477 KMT2BQ9UMN6 2715 aaPredicted RBP24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 MAPK13O15264 365 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 BEST1O76090 585 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 CFIP05156 583 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 KRT13P13646 458 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 TYRP14679 529 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 ACO1P21399 889 aaKnown RBP24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 VAMP7P51809 220 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 DLG4P78352 724 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 GFPT1Q06210 699 aaPredicted RBP24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 KLHDC10Q6PID8 442 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 TPGS1Q6ZTW0 290 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 C12orf29Q8N999 325 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 KIAA0895Q8NCT3 520 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 CDK5RAP1Q96SZ6 601 aaKnown RBP24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 MBD1Q9UIS9 605 aaPredicted RBP24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 DNMT3LQ9UJW3 386 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 PILRBQ9UKJ0 227 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 SLC6A14Q9UN76 642 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 ZNF510Q9Y2H8 683 aa24.34■■□□□ 1.49
SMARCD1-209ENST00000550477 CACNG3O60359 315 aa24.33■■□□□ 1.49
SMARCD1-209ENST00000550477 HLA-DRAP01903 254 aa24.33■■□□□ 1.49
SMARCD1-209ENST00000550477 RALAP11233 206 aa24.33■■□□□ 1.49
SMARCD1-209ENST00000550477 ENGP17813 658 aa24.33■■□□□ 1.49
SMARCD1-209ENST00000550477 RPL13P26373 211 aaKnown RBP24.33■■□□□ 1.49
SMARCD1-209ENST00000550477 MAPK8P45983 427 aa24.33■■□□□ 1.49
SMARCD1-209ENST00000550477 ORC1Q13415 861 aa24.33■■□□□ 1.49
SMARCD1-209ENST00000550477 E2F5Q15329 346 aa24.33■■□□□ 1.49
SMARCD1-209ENST00000550477 INTS8Q75QN2 995 aaKnown RBP24.33■■□□□ 1.49
SMARCD1-209ENST00000550477 MARK1Q9P0L2 795 aa24.33■■□□□ 1.49
SMARCD1-209ENST00000550477 TRAF3IP3Q9Y228 551 aa24.33■■□□□ 1.49
SMARCD1-209ENST00000550477 PLXND1Q9Y4D7 1925 aa24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 ACTN4O43707 911 aaKnown RBP24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 TBX18O95935 607 aa24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 CHRM1P11229 460 aaPredicted RBP24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 GABRG2P18507 467 aa24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 CMA1P23946 247 aa24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 ASPAP45381 313 aa24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 DGKGP49619 791 aa24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 DNM1Q05193 864 aaKnown RBP24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 ZNF33AQ06730 810 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms