RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 USP3Q9Y6I4 520 aa13.14□□□□□ -0.31
GCN1-204ENST00000548132 PI4KAP42356 2102 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 TULP2O00295 520 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 AXIN1O15169 862 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 ATG13O75143 517 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 TULP3O75386 442 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 APBB3O95704 486 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 ADH1CP00326 375 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 RPL13P26373 211 aaKnown RBP13.13□□□□□ -0.31
GCN1-204ENST00000548132 AMPD2Q01433 879 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 SF3A2Q15428 464 aaKnown RBP13.13□□□□□ -0.31
GCN1-204ENST00000548132 ZNF394Q53GI3 561 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 C2orf27AQ580R0 203 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 TMEM25Q86YD3 366 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 ALLCQ8N6M5 410 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 GPR161Q8N6U8 529 aaKnown RBP13.13□□□□□ -0.31
GCN1-204ENST00000548132 OLIG1Q8TAK6 271 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 OTUB2Q96DC9 234 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 CYFIP2Q96F07 1278 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 ZC3H10Q96K80 434 aaKnown RBP13.13□□□□□ -0.31
GCN1-204ENST00000548132 CNOT6LQ96LI5 555 aaKnown RBP13.13□□□□□ -0.31
GCN1-204ENST00000548132 GSDMAQ96QA5 445 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 NUDT5Q9UKK9 219 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 MAN1B1Q9UKM7 699 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 AKAP13Q12802 2813 aa13.13□□□□□ -0.31
GCN1-204ENST00000548132 A0A0A0MRY4 1105 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 SLC9A3R1O14745 358 aaPredicted RBP13.12□□□□□ -0.31
GCN1-204ENST00000548132 CACNG3O60359 315 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 GADD45BO75293 160 aaPredicted RBP13.12□□□□□ -0.31
GCN1-204ENST00000548132 EPB41P11171 864 aaKnown RBP13.12□□□□□ -0.31
GCN1-204ENST00000548132 ACO1P21399 889 aaKnown RBP13.12□□□□□ -0.31
GCN1-204ENST00000548132 NR1H3Q13133 447 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 DCAF17Q5H9S7 520 aaPredicted RBP13.12□□□□□ -0.31
GCN1-204ENST00000548132 RAB41Q5JT25 222 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 EMC10Q5UCC4 262 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 ARHGAP17Q68EM7 881 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 TCEAL6Q6IPX3 200 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 TTI2Q6NXR4 508 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 CEP68Q76N32 757 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 CCDC33Q8N5R6 958 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 TERB1Q8NA31 727 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 SECISBP2LQ93073 1101 aaKnown RBP13.12□□□□□ -0.31
GCN1-204ENST00000548132 TCEAL3Q969E4 200 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 PNKPQ96T60 521 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 ZSWIM1Q9BR11 485 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 DUSP16Q9BY84 665 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 FBXO44Q9H4M3 255 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 ARHGEF4Q9NR80 690 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 TLR8Q9NR97 1041 aaKnown RBP13.12□□□□□ -0.31
GCN1-204ENST00000548132 SPHK2Q9NRA0 654 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 RMND1Q9NWS8 449 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 RAB20Q9NX57 234 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 MARK1Q9P0L2 795 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 TBC1D14Q9P2M4 693 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 CDV3Q9UKY7 258 aaKnown RBP13.12□□□□□ -0.31
GCN1-204ENST00000548132 CACNA1EQ15878 2313 aa13.12□□□□□ -0.31
GCN1-204ENST00000548132 ASPMQ8IZT6 3477 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 PRR5-ARHGAP8B1AHC4 643 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 SLC30A4O14863 429 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 CETN3O15182 167 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 STC2O76061 302 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 KLF8O95600 359 aaPredicted RBP13.11□□□□□ -0.31
GCN1-204ENST00000548132 KLKB1P03952 638 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 ARHGAP8P85298 464 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 LRRC63Q05C16 580 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 CUL2Q13617 745 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 CRY1Q16526 586 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 PMS2CLQ68D20 193 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 ANO7Q6IWH7 933 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 KLHDC10Q6PID8 442 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 TOGARAM2Q6ZUX3 1019 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 HTR3DQ70Z44 454 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 CACNA2D4Q7Z3S7 1137 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 TXNDC5Q8NBS9 432 aaKnown RBP13.11□□□□□ -0.31
GCN1-204ENST00000548132 TSTD1Q8NFU3 115 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 NETO1Q8TDF5 533 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 KAT5Q92993 513 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 FAXDC2Q96IV6 333 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 LOXL4Q96JB6 756 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 ARRDC1-AS1Q9H2J1 176 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 SH3BP1Q9Y3L3 701 aa13.11□□□□□ -0.31
GCN1-204ENST00000548132 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
GCN1-204ENST00000548132 WDFY3Q8IZQ1 3526 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 IGF2RP11717 2491 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.1□□□□□ -0.31
GCN1-204ENST00000548132 DCDC2BA2VCK2 349 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 PPP1R3GB7ZBB8 358 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 GABBR2O75899 941 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 CCDC192P0DO97 292 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 RARGP13631 454 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 TIE1P35590 1138 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 MPLP40238 635 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 GRIA2P42262 883 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 NUCB2P80303 420 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 MRPS21P82921 87 aaKnown RBP13.1□□□□□ -0.31
GCN1-204ENST00000548132 GOLGA7BQ2TAP0 167 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 PKDCCQ504Y2 493 aa13.1□□□□□ -0.31
GCN1-204ENST00000548132 EGFLAMQ63HQ2 1017 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms