RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 SCUBE3Q8IX30 993 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 DRC7Q8IY82 874 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 KIAA1958Q8N8K9 716 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 CLEC4CQ8WTT0 213 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 USP13Q92995 863 aaPredicted RBP11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 CYP2S1Q96SQ9 504 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 DNAJC7Q99615 494 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 KXD1Q9BQD3 176 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 NACA2Q9H009 215 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 RNF38Q9H0F5 515 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 HAUS4Q9H6D7 363 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 OLA1Q9NTK5 396 aaKnown RBP11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 ASNSD1Q9NWL6 643 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 COL4A3Q01955 1670 aa11.93□□□□□ -0.5
CALCOCO1-208ENST00000547988 MUC3AQ02505 3323 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 A0A0C4DFX4 3053 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 MFAP3LO75121 409 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 ERBB2P04626 1255 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 GLI1P08151 1106 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 TNFAIP3P21580 790 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 MMP8P22894 467 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 SCNN1AP37088 669 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 VIPR2P41587 438 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 NSFP46459 744 aaKnown RBP11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 GOLGA8FQ08AF8 430 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 GOLGA8DPQ0D2H9 430 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 FCHO2Q0JRZ9 810 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 USP4Q13107 963 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 TBX2Q13207 712 aaPredicted RBP11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 ZNF77Q15935 545 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 CLEC16AQ2KHT3 1053 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 TDRD12Q587J7 1177 aaKnown RBP11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 EFHC1Q5JVL4 640 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 C10orf120Q5SQS8 335 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 HGSNATQ68CP4 663 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 RSRC2Q7L4I2 434 aaKnown RBP11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 UBALD2Q8IYN6 164 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 SLC44A3Q8N4M1 653 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 OR8K1Q8NGG5 319 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 BPIFB1Q8TDL5 484 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 RSAD2Q8WXG1 361 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 CPA5Q8WXQ8 436 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 NDRG1Q92597 394 aaKnown RBP11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 C18orf8Q96DM3 657 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 PCDHB18PQ96TA0 734 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 RPP25Q9BUL9 199 aaKnown RBP11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 SMG9Q9H0W8 520 aaKnown RBP11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 SEPT11Q9NVA2 429 aaKnown RBP11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 TJP2Q9UDY2 1190 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 MUTYHQ9UIF7 546 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 DNMT3LQ9UJW3 386 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 STRIP2Q9ULQ0 834 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 DUSP12Q9UNI6 340 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 CCL26Q9Y258 94 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 CPQQ9Y646 472 aa11.92□□□□□ -0.5
CALCOCO1-208ENST00000547988 BDP1A6H8Y1 2624 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 DOCK4Q8N1I0 1966 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 HSF2BPO75031 334 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 SRFP11831 508 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 SKILP12757 684 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 CDC25BP30305 580 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 GSCP56915 257 aaPredicted RBP11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 YWHAZP63104 245 aaKnown RBP11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 SLC6A3Q01959 620 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 ARHGAP29Q52LW3 1261 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 OR6B2Q6IFH4 312 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 MSANTD2Q6P1R3 559 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 OLFML1Q6UWY5 402 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 HFE2Q6ZVN8 426 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 FAM183BPQ6ZVS7 135 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 SLC26A9Q7LBE3 791 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 ZNF571Q7Z3V5 609 aaPredicted RBP11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 VPS36Q86VN1 386 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 PHF13Q86YI8 300 aaPredicted RBP11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 YAF2Q8IY57 180 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 OLIG1Q8TAK6 271 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 RNF139Q8WU17 664 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 FAM149B1Q96BN6 582 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 RSPRY1Q96DX4 576 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 ZFRQ96KR1 1074 aaKnown RBP11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 TRMT61BQ9BVS5 477 aaKnown RBP11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 COL25A1Q9BXS0 654 aaPredicted RBP11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 PLA2G2FQ9BZM2 168 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 POPDC2Q9HBU9 364 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 SLC2A4RGQ9NR83 387 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 ABHD10Q9NUJ1 306 aa11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 ZNHIT6Q9NWK9 470 aaKnown RBP11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 THG1LQ9NWX6 298 aaKnown RBP11.91□□□□□ -0.5
CALCOCO1-208ENST00000547988 TRIOO75962 3097 aa11.9□□□□□ -0.5
CALCOCO1-208ENST00000547988 AKR1B15C9JRZ8 316 aaPredicted RBP11.9□□□□□ -0.5
CALCOCO1-208ENST00000547988 LEFTY2O00292 366 aa11.9□□□□□ -0.5
CALCOCO1-208ENST00000547988 CHADO15335 359 aa11.9□□□□□ -0.5
CALCOCO1-208ENST00000547988 TBX18O95935 607 aa11.9□□□□□ -0.5
CALCOCO1-208ENST00000547988 CALB1P05937 261 aa11.9□□□□□ -0.5
CALCOCO1-208ENST00000547988 GZMAP12544 262 aa11.9□□□□□ -0.5
CALCOCO1-208ENST00000547988 NCAM1P13591 858 aa11.9□□□□□ -0.5
CALCOCO1-208ENST00000547988 COG7P83436 770 aa11.9□□□□□ -0.5
CALCOCO1-208ENST00000547988 ZXDBP98169 803 aa11.9□□□□□ -0.5
CALCOCO1-208ENST00000547988 C1QBPQ07021 282 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms