RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 IGBP1P78318 339 aa17.78■□□□□ 0.44
LETMD1-210ENST00000547555 CLDN10P78369 228 aa17.78■□□□□ 0.44
LETMD1-210ENST00000547555 ZNF200P98182 395 aaPredicted RBP17.78■□□□□ 0.44
LETMD1-210ENST00000547555 SLC18A2Q05940 514 aa17.78■□□□□ 0.44
LETMD1-210ENST00000547555 LRRC26Q2I0M4 334 aa17.78■□□□□ 0.44
LETMD1-210ENST00000547555 TMCO4Q5TGY1 634 aa17.78■□□□□ 0.44
LETMD1-210ENST00000547555 EXOC8Q8IYI6 725 aa17.78■□□□□ 0.44
LETMD1-210ENST00000547555 HAPLN3Q96S86 360 aa17.78■□□□□ 0.44
LETMD1-210ENST00000547555 CBWD1Q9BRT8 395 aa17.78■□□□□ 0.44
LETMD1-210ENST00000547555 NTPCRQ9BSD7 190 aaKnown RBP17.78■□□□□ 0.44
LETMD1-210ENST00000547555 STN1Q9H668 368 aaKnown RBP17.78■□□□□ 0.44
LETMD1-210ENST00000547555 PARVAQ9NVD7 372 aa17.78■□□□□ 0.44
LETMD1-210ENST00000547555 R3HDM2Q9Y2K5 976 aaKnown RBP17.78■□□□□ 0.44
LETMD1-210ENST00000547555 GAS2O43903 313 aaKnown RBP17.77■□□□□ 0.44
LETMD1-210ENST00000547555 TBX10O75333 385 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 KRT4P19013 534 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 PRKD1Q15139 912 aaPredicted RBP17.77■□□□□ 0.44
LETMD1-210ENST00000547555 OASLQ15646 514 aaKnown RBP17.77■□□□□ 0.44
LETMD1-210ENST00000547555 HIF1AQ16665 826 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 TRIM60Q495X7 471 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 SH2D4BQ5SQS7 431 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 PPP1R15BQ5SWA1 713 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 ARHGAP22Q7Z5H3 698 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 POLNQ7Z5Q5 900 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 SERINC5Q86VE9 423 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 PPIL6Q8IXY8 311 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 RDH13Q8NBN7 331 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 MZB1Q8WU39 189 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 C7orf26Q96N11 449 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 VPS37BQ9H9H4 285 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 XPNPEP1Q9NQW7 623 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 C1orf112Q9NSG2 853 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 TRMT13Q9NUP7 481 aaKnown RBP17.77■□□□□ 0.44
LETMD1-210ENST00000547555 MKS1Q9NXB0 559 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 HEY2Q9UBP5 337 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 RABGEF1Q9UJ41 708 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 GRID1Q9ULK0 1009 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 TMCO1Q9UM00 188 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 CNTN6Q9UQ52 1028 aa17.77■□□□□ 0.44
LETMD1-210ENST00000547555 FARP1Q9Y4F1 1045 aaPredicted RBP17.77■□□□□ 0.44
LETMD1-210ENST00000547555 SMIM31A0A1B0GVY4 71 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 POC1B-GALNT4F8VUJ3 575 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 CDC25CP30307 473 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 ARSEP51690 589 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 RTP1P59025 263 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 DSG1Q02413 1049 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 ZBTB16Q05516 673 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 ITGA9Q13797 1035 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 EMC2Q15006 297 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 NME8Q8N427 588 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 PLEKHO2Q8TD55 490 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 SLC7A3Q8WY07 619 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 CYTH2Q99418 400 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 SUDS3Q9H7L9 328 aaPredicted RBP17.77■□□□□ 0.43
LETMD1-210ENST00000547555 NPHS2Q9NP85 383 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 TAS2R1Q9NYW7 299 aa17.77■□□□□ 0.43
LETMD1-210ENST00000547555 TANC1Q9C0D5 1861 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 SMIM35A0A1B0GVV1 85 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 DLDP09622 509 aaKnown RBP17.76■□□□□ 0.43
LETMD1-210ENST00000547555 PTK7Q13308 1070 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 LAMB3Q13751 1172 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 TRIP13Q15645 432 aaPredicted RBP17.76■□□□□ 0.43
LETMD1-210ENST00000547555 TAF2Q6P1X5 1199 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 DSTYKQ6XUX3 929 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 C15orf39Q6ZRI6 1047 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 NIPA2Q8N8Q9 360 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 FEZF2Q8TBJ5 459 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 SEMA4DQ92854 862 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 KAT5Q92993 513 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 MAK16Q9BXY0 300 aaKnown RBP17.76■□□□□ 0.43
LETMD1-210ENST00000547555 TRPV6Q9H1D0 765 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 FAM96AQ9H5X1 160 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 ZNF148Q9UQR1 794 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 SIP14410 1827 aa17.76■□□□□ 0.43
LETMD1-210ENST00000547555 H0Y3Z8 333 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 TLR3O15455 904 aaKnown RBP17.75■□□□□ 0.43
LETMD1-210ENST00000547555 PQBP1O60828 265 aaKnown RBP17.75■□□□□ 0.43
LETMD1-210ENST00000547555 TM7SF2O76062 418 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 CALB1P05937 261 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 ACTR3P61158 418 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 TLE2Q04725 743 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 WDR44Q5JSH3 913 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 ATG16L1Q676U5 607 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 EFCAB12Q6NXP0 572 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 ACAD11Q709F0 780 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 ZC3H18Q86VM9 953 aaKnown RBP17.75■□□□□ 0.43
LETMD1-210ENST00000547555 MYLK4Q86YV6 388 aaPredicted RBP17.75■□□□□ 0.43
LETMD1-210ENST00000547555 KSR1Q8IVT5 923 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 ST13P4Q8IZP2 240 aaPredicted RBP17.75■□□□□ 0.43
LETMD1-210ENST00000547555 PDCD7Q8N8D1 485 aaKnown RBP17.75■□□□□ 0.43
LETMD1-210ENST00000547555 MCPH1Q8NEM0 835 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 PYROXD1Q8WU10 500 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 APOPT1Q96IL0 206 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 SLITRK1Q96PX8 696 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 HERPUD2Q9BSE4 406 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 ZNF518BQ9C0D4 1074 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 KANSL3Q9P2N6 904 aa17.75■□□□□ 0.43
LETMD1-210ENST00000547555 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.75■□□□□ 0.43
LETMD1-210ENST00000547555 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.74■□□□□ 0.43
LETMD1-210ENST00000547555 AP1G2O75843 785 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms