RNA–Protein interactions for RNA: ENST00000546561.2

TSPAN8-203, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,168 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-203ENST00000546561 PBX3P40426 434 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 PTPN9P43378 593 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 RNASE9P60153 205 aaKnown RBP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 MRPS5P82675 430 aaKnown RBP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 HTRA4P83105 476 aaPredicted RBP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 GPR17Q13304 367 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 SMC1AQ14683 1233 aaKnown RBP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 PPP2R5EQ16537 467 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 PTPROQ16827 1216 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 LINC01559Q495D7 138 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 RAB41Q5JT25 222 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 TMEM240Q5SV17 173 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 LLGL2Q6P1M3 1020 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 CC2D1AQ6P1N0 951 aaPredicted RBP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 PAQR9Q6ZVX9 377 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 ZNF572Q7Z3I7 529 aaPredicted RBP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 DDX53Q86TM3 631 aaKnown RBP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 CREG2Q8IUH2 290 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 CCDC50Q8IVM0 306 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 GPR65Q8IYL9 337 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 SCML4Q8N228 414 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 RASGEF1CQ8N431 466 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 RIN2Q8WYP3 895 aaPredicted RBP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 UBXN4Q92575 508 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 DPF3Q92784 378 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 CD101Q93033 1021 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 RNPC3Q96LT9 517 aaKnown RBP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 CEP295NLQ96MC4 621 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 RAD9AQ99638 391 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 SMOQ99835 787 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 LPIN3Q9BQK8 851 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 FBXO44Q9H4M3 255 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 POPDC2Q9HBU9 364 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 ABI2Q9NYB9 513 aaPredicted RBP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 EHD2Q9NZN4 543 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 MTRRQ9UBK8 725 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 TJP2Q9UDY2 1190 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 MTUS1Q9ULD2 1270 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 TTC7AQ9ULT0 858 aaPredicted RBP8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 NR2E3Q9Y5X4 410 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 BACE2Q9Y5Z0 518 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 GBF1Q92538 1859 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 PLXNA4Q9HCM2 1894 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 GREB1Q4ZG55 1949 aa8.17□□□□□ -1.1
TSPAN8-203ENST00000546561 C2CD4BA6NLJ0 364 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 F8VP50 259 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 CCDC188H7C350 402 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 PRPSAP2O60256 369 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 RTN3O95197 1032 aaPredicted RBP8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 GJB6O95452 261 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 ZBED1O96006 694 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 OR4Q2P0C623 313 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 ATP2A2P16615 1042 aaKnown RBP8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 SYN1P17600 705 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 NOS2P35228 1153 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 GJC1P36383 396 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 MATKP42679 507 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 ARPP19P56211 112 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 DAOAP59103 153 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 RPL10AP62906 217 aaKnown RBP8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 YWHAZP63104 245 aaKnown RBP8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 DSG1Q02413 1049 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 CCDC142Q17RM4 750 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 RTP2Q5QGT7 225 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 TPGS2Q68CL5 300 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 SLC8B1Q6J4K2 584 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 STRADAQ7RTN6 431 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 TMEM173Q86WV6 379 aaPredicted RBP8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 HERC6Q8IVU3 1022 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 SCN4BQ8IWT1 228 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 KATNAL2Q8IYT4 538 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 RNF168Q8IYW5 571 aaPredicted RBP8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 ARHGAP18Q8N392 663 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 EMC1Q8N766 993 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 EXD1Q8NHP7 514 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 JOSD2Q8TAC2 188 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 COG1Q8WTW3 980 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 RXFP2Q8WXD0 754 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 C8orf48Q96LL4 319 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 TMEM209Q96SK2 561 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 ULBP1Q9BZM6 244 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 TRIM7Q9C029 511 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 CHST7Q9NS84 486 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 TMLHEQ9NVH6 421 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 COMMD8Q9NX08 183 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 HSFX1Q9UBD0 423 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 TMEM59LQ9UK28 342 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 ZMYND8Q9ULU4 1186 aaPredicted RBP8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 MAFFQ9ULX9 164 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 CDY1Q9Y6F8 540 aa8.16□□□□□ -1.1
TSPAN8-203ENST00000546561 MTMR11A4FU01 709 aa8.15□□□□□ -1.1
TSPAN8-203ENST00000546561 ZNF185O15231 689 aa8.15□□□□□ -1.1
TSPAN8-203ENST00000546561 CTIFO43310 598 aaKnown RBP8.15□□□□□ -1.1
TSPAN8-203ENST00000546561 TBC1D4O60343 1298 aa8.15□□□□□ -1.1
TSPAN8-203ENST00000546561 LPXNO60711 386 aa8.15□□□□□ -1.1
TSPAN8-203ENST00000546561 LRCH4O75427 683 aa8.15□□□□□ -1.1
TSPAN8-203ENST00000546561 TADA3O75528 432 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms