RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 NANOGNBQ7Z5D8 188 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 SLC25A41Q8N5S1 370 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 KCTD17Q8N5Z5 321 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 GBP7Q8N8V2 638 aaPredicted RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 SLAIN1Q8ND83 568 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 NPLOC4Q8TAT6 608 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 SEC16BQ96JE7 1060 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 ZIC5Q96T25 663 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 DUSP9Q99956 384 aaKnown RBP8.91□□□□□ -0.98
CLIP1-218ENST00000545889 SLC39A10Q9ULF5 831 aa8.91□□□□□ -0.98
CLIP1-218ENST00000545889 A0A1B0GUL6 1792 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 HEATR9A2RTY3 570 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 F9P00740 461 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 CTSEP14091 401 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 CAPZA2P47755 286 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 SERPINB4P48594 390 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 INPP1P49441 399 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 OXCT1P55809 520 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 EIF3EP60228 445 aaKnown RBP8.9□□□□□ -0.98
CLIP1-218ENST00000545889 RHOAP61586 193 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 GPS1Q13098 491 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 FBXO47Q5MNV8 452 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 TMCO4Q5TGY1 634 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 LLGL2Q6P1M3 1020 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 FAM84AQ96KN4 292 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 CCDC3Q9BQI4 270 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 RNPEPQ9H4A4 650 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 PCDHB2Q9Y5E7 798 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 ARAP2Q8WZ64 1704 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 KPNA3O00505 521 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-218ENST00000545889 ZNF185O15231 689 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 ATP5BP06576 529 aaKnown RBP8.9□□□□□ -0.98
CLIP1-218ENST00000545889 ERVK-10P10266 1014 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 GARTP22102 1010 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 FMO5P49326 533 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 RAD23BP54727 409 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 CSE1LP55060 971 aaKnown RBP8.9□□□□□ -0.98
CLIP1-218ENST00000545889 PDK1Q15118 436 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 ATAT1Q5SQI0 421 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 OTOP2Q7RTS6 562 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 WDR75Q8IWA0 830 aaKnown RBP8.9□□□□□ -0.98
CLIP1-218ENST00000545889 IPMKQ8NFU5 416 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 CHP1Q99653 195 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 GPR20Q99678 358 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 PTPN18Q99952 460 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 TLR8Q9NR97 1041 aaKnown RBP8.9□□□□□ -0.98
CLIP1-218ENST00000545889 ABHD10Q9NUJ1 306 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 GALNT8Q9NY28 637 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 NOVA2Q9UNW9 492 aaKnown RBP8.9□□□□□ -0.98
CLIP1-218ENST00000545889 TELO2Q9Y4R8 837 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 CCDC188H7C350 402 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 OPHN1O60890 802 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 SMPD1P17405 629 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 CHRM3P20309 590 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 TMPRSS15P98073 1019 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 PPIGQ13427 754 aaKnown RBP eCLIP8.9□□□□□ -0.982e-7■□□□□ 8.5
CLIP1-218ENST00000545889 PDXDC1Q6P996 788 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 C11orf96Q7Z7L8 435 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 FAM129AQ9BZQ8 928 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 ABCG4Q9H172 646 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 NEUROG2Q9H2A3 272 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 WDR41Q9HAD4 459 aa8.9□□□□□ -0.98
CLIP1-218ENST00000545889 CORO1CQ9ULV4 474 aaPredicted RBP8.9□□□□□ -0.98
CLIP1-218ENST00000545889 NFASCO94856 1347 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 KLC1Q07866 573 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 P3H1Q32P28 736 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 TTLL9Q3SXZ7 439 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 DUSP28Q4G0W2 176 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 SLC30A5Q8TAD4 765 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 CPA5Q8WXQ8 436 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 TTC17Q96AE7 1141 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 FTHL17Q9BXU8 183 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 ARHGAP39Q9C0H5 1083 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 CAPN10Q9HC96 672 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 SNX24Q9Y343 169 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 MYH8P13535 1937 aa8.9□□□□□ -0.99
CLIP1-218ENST00000545889 A0A0U1RQJ8 604 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 CBX4O00257 560 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 KCNN4O15554 427 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 APRTP07741 180 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 AKAP5P24588 427 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 NUMBP49757 651 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 PRMT2P55345 433 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 TBC1D25Q3MII6 688 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 RAD9BQ6WBX8 426 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 TRIM59Q8IWR1 403 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 ATXN7L3BQ96GX2 97 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 NAF1Q96HR8 494 aaKnown RBP8.89□□□□□ -0.99
CLIP1-218ENST00000545889 PPP1R2P1Q96PQ5 205 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 GAD1Q99259 594 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 SYT15Q9BQS2 421 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 FBXO44Q9H4M3 255 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 TMEM8AQ9HCN3 771 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 SNTG2Q9NY99 539 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 ANKRD63C9JTQ0 380 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 AGRPO00253 132 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 MTSS1O43312 755 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 GLRA2P23416 452 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 GJA8P48165 433 aa8.89□□□□□ -0.99
CLIP1-218ENST00000545889 SPIRE1Q08AE8 756 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms