RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 GOLPH3LQ9H4A5 285 aa17.18■□□□□ 0.34
DDX55-212ENST00000544738 CCDC86Q9H6F5 360 aaKnown RBP17.18■□□□□ 0.34
DDX55-212ENST00000544738 ANAPC1Q9H1A4 1944 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 ANTXRLA6NF34 631 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 UPK3BL1B0FP48 263 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 UPK3BL2E5RIL1 263 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 TNFRSF10BO14763 440 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 NFATC1O95644 943 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 ABL1P00519 1130 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 ASS1P00966 412 aaKnown RBP17.17■□□□□ 0.34
DDX55-212ENST00000544738 SLC7A9P82251 487 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 TAF10Q12962 218 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 ZNF423Q2M1K9 1284 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 EML3Q32P44 896 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 SCARA5Q6ZMJ2 495 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 RAB44Q7Z6P3 723 aaPredicted RBP17.17■□□□□ 0.34
DDX55-212ENST00000544738 FAM35AQ86V20 835 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 CRYBG2Q8N1P7 616 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 FRMD1Q8N878 549 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 CCDC26Q8TAB7 109 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 USP33Q8TEY7 942 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 SMARCD1Q96GM5 515 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 DMAP1Q9NPF5 467 aaPredicted RBP17.17■□□□□ 0.34
DDX55-212ENST00000544738 TMEM30AQ9NV96 361 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 COMMD8Q9NX08 183 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 MAPK8IP1Q9UQF2 711 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 WNT6Q9Y6F9 365 aa17.17■□□□□ 0.34
DDX55-212ENST00000544738 ATXN2Q99700 1313 aaKnown RBP17.17■□□□□ 0.34
DDX55-212ENST00000544738 GOLGA6L4A6NEF3 574 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 OPHN1O60890 802 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 OLFM2O95897 454 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 OAS1P00973 400 aaKnown RBP17.16■□□□□ 0.34
DDX55-212ENST00000544738 HLA-DRAP01903 254 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 PSMC2P35998 433 aaKnown RBP17.16■□□□□ 0.34
DDX55-212ENST00000544738 PIK3CAP42336 1068 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 PI4KAP42356 2102 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 CACNA2D1P54289 1103 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 ADAM9Q13443 819 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 EDRF1Q3B7T1 1238 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 SLC23A3Q6PIS1 610 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 ACOT1Q86TX2 421 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 DDX42Q86XP3 938 aaKnown RBP eCLIP17.16■□□□□ 0.34
DDX55-212ENST00000544738 FAM186BQ8IYM0 893 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 DNAI2Q9GZS0 605 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 RNF38Q9H0F5 515 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 SDCBP2Q9H190 292 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 GDPD2Q9HCC8 539 aa17.16■□□□□ 0.34
DDX55-212ENST00000544738 APC2O95996 2303 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 LEFTY2O00292 366 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 SLC9A3R1O14745 358 aaPredicted RBP17.15■□□□□ 0.34
DDX55-212ENST00000544738 ALDH1A2O94788 518 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 ITPKAP23677 461 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 NDST1P52848 882 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 NUCB2P80303 420 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 GFPT1Q06210 699 aaPredicted RBP17.15■□□□□ 0.34
DDX55-212ENST00000544738 IFRD2Q12894 506 aaPredicted RBP17.15■□□□□ 0.34
DDX55-212ENST00000544738 CRY1Q16526 586 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 C1orf220Q5T0J3 134 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 LYSMD4Q5XG99 296 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 PAQR9Q6ZVX9 377 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 PNPLA1Q8N8W4 532 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 CCDC150Q8NCX0 1101 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 FBXO32Q969P5 355 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 SPACA7Q96KW9 195 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 KCNK16Q96T55 309 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 LINC00597Q9H2U6 94 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 RMND1Q9NWS8 449 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 RAXQ9Y2V3 346 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 CPQQ9Y646 472 aa17.15■□□□□ 0.34
DDX55-212ENST00000544738 K7EQS6 105 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 AP1G2O75843 785 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 GTF2H1P32780 548 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 P2RY2P41231 377 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 ASPAP45381 313 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 GCLMP48507 274 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 ZXDBP98169 803 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 SNX30Q5VWJ9 437 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 TMEM92Q6UXU6 159 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 FUKQ8N0W3 1084 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 DEFB119Q8N690 84 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 OR2I1PQ8NGU4 316 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 OLIG1Q8TAK6 271 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 MDM1Q8TC05 714 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 ELMO3Q96BJ8 720 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 CAMK1GQ96NX5 476 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 GTPBP4Q9BZE4 634 aaKnown RBP17.14■□□□□ 0.33
DDX55-212ENST00000544738 CYP3A43Q9HB55 503 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 CSNK1G1Q9HCP0 422 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 IL37Q9NZH6 218 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 BCCIPQ9P287 314 aaKnown RBP eCLIP17.14■□□□□ 0.33
DDX55-212ENST00000544738 MMP17Q9ULZ9 603 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 SLC6A14Q9UN76 642 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 PCDHB9Q9Y5E1 797 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 URB1O60287 2271 aaKnown RBP17.14■□□□□ 0.33
DDX55-212ENST00000544738 MAST4O15021 2626 aa17.14■□□□□ 0.33
DDX55-212ENST00000544738 STX10O60499 249 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 MBL2P11226 248 aaPredicted RBP17.13■□□□□ 0.33
DDX55-212ENST00000544738 HNRNPLP14866 589 aaKnown RBP eCLIP17.13■□□□□ 0.33
DDX55-212ENST00000544738 TUBP50607 506 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 SLC5A3P53794 718 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms