RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 PRDM5Q9NQX1 630 aaPredicted RBP13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 TELO2Q9Y4R8 837 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 SNX5Q9Y5X3 404 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 CHD4Q14839 1912 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 PROCP04070 461 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 IL10P22301 178 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 ACAT1P24752 427 aaKnown RBP13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 MAP4P27816 1152 aaKnown RBP13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 PKNOX1P55347 436 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 DSG1Q02413 1049 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 TMEM132BQ14DG7 1078 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 BOLA3Q53S33 107 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 ZNF677Q86XU0 584 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 MAN1C1Q9NR34 630 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 CCDC88AQ3V6T2 1871 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 IGLV3-22A0A075B6J6 115 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 IRF6O14896 467 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 CYP3A4P08684 503 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 GRIK1P39086 918 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 MMRN1Q13201 1228 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 SPDYAQ5MJ70 313 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 MTHFD1LQ6UB35 978 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 NLGN2Q8NFZ4 835 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 PHF21BQ96EK2 531 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 MECRQ9BV79 373 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 FAM96AQ9H5X1 160 aa13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 IARS2Q9NSE4 1012 aaKnown RBP13.37□□□□□ -0.27
TUBGCP2-210ENST00000543663 A0A087WZ62 844 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 RALBP11234 206 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 PRKCIP41743 596 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 MMP14P50281 582 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 AP3M2P53677 418 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 TAS2R40P59535 323 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 SLC25A3Q00325 362 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 STRA8Q7Z7C7 330 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 CNDP1Q96KN2 507 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 FDXACB1Q9BRP7 624 aaPredicted RBP13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 UTP6Q9NYH9 597 aaKnown RBP13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 SCN7AQ01118 1682 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 FDX1P10109 184 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 MUTP22033 750 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 AMPD1P23109 780 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 RBL1P28749 1068 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 OCA2Q04671 838 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 CCDC85BQ15834 202 aaPredicted RBP13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 N4BP2L1Q5TBK1 243 aaPredicted RBP13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 CYP2R1Q6VVX0 501 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 PCDHB18PQ96TA0 734 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 RUBCNLQ9H714 662 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 DNAJC8O75937 253 aaPredicted RBP13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 MIPP30301 263 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 INPP1P49441 399 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 PTPN11Q06124 597 aaPredicted RBP13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 PDAP1Q13442 181 aaKnown RBP13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 RBBP7Q16576 425 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 DENND1BQ6P3S1 775 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 GCNAQ96QF7 691 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 DCUN1D5Q9BTE7 237 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 TIPINQ9BVW5 301 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 FRMPD4Q14CM0 1322 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 IRS2Q9Y4H2 1338 aa13.36□□□□□ -0.27
TUBGCP2-210ENST00000543663 UTRNP46939 3433 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 CYP3A7-CYP3A51PA0A087WV96 503 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 HNRNPCL1O60812 293 aaKnown RBP13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 ETS2P15036 469 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 CALB2P22676 271 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 CYP3A7P24462 503 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 HNRNPH3P31942 346 aaKnown RBP13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 SERPINB9P50453 376 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 FMO1Q01740 532 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 ZNF235Q14590 738 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 C3orf20Q8ND61 904 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 TFB1MQ8WVM0 346 aaKnown RBP13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 CKAP2Q8WWK9 683 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 BSNDQ8WZ55 320 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 EDEM1Q92611 657 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 ZBTB18Q99592 522 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 SH3GL2Q99962 352 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 ILKAPQ9H0C8 392 aaPredicted RBP13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 NUDT5Q9UKK9 219 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 MAGEA13PA6NCF6 341 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 TULP2O00295 520 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 O00370 1275 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 NFKBIAP25963 317 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 GIPC2Q8TF65 315 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 HES6Q96HZ4 224 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 CATSPER2Q96P56 530 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 SMARCAD1Q9H4L7 1026 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 RUVBL2Q9Y230 463 aaKnown RBP13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 ZNF286BP0CG31 522 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 HIRAP54198 1017 aaPredicted RBP13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 TSPY1Q01534 308 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 POU6F1Q14863 301 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 PTAR1Q7Z6K3 402 aaPredicted RBP13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 MIB1Q86YT6 1006 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 OR5B17Q8NGF7 314 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 MARK4Q96L34 752 aa13.35□□□□□ -0.27
TUBGCP2-210ENST00000543663 LRFN2Q9ULH4 789 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms