RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 TERB1Q8NA31 727 aa18.4■□□□□ 0.54
PPP1CA-210ENST00000542876 CCDC47Q96A33 483 aaKnown RBP18.4■□□□□ 0.54
PPP1CA-210ENST00000542876 XPO6Q96QU8 1125 aaKnown RBP18.4■□□□□ 0.54
PPP1CA-210ENST00000542876 KCTD10Q9H3F6 313 aa18.4■□□□□ 0.54
PPP1CA-210ENST00000542876 CSNK1G1Q9HCP0 422 aa18.4■□□□□ 0.54
PPP1CA-210ENST00000542876 USP25Q9UHP3 1055 aa18.4■□□□□ 0.54
PPP1CA-210ENST00000542876 RCOR1Q9UKL0 485 aa18.4■□□□□ 0.54
PPP1CA-210ENST00000542876 AP5Z1O43299 807 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 ACTN4O43707 911 aaKnown RBP18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 BEST1O76090 585 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 ASS1P00966 412 aaKnown RBP18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 MYL1P05976 194 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 CHRM1P11229 460 aaPredicted RBP18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 CEACAM1P13688 526 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 HOXB2P14652 356 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 CSRP1P21291 193 aaKnown RBP18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 ADORA2BP29275 332 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 NTSR1P30989 418 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 DNM1Q05193 864 aaKnown RBP18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 HTR3DQ70Z44 454 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 ABCA7Q8IZY2 2146 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 ZMIZ2Q8NF64 920 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 BBS2Q9BXC9 721 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 DNAJC17Q9NVM6 304 aaKnown RBP18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 WDR35Q9P2L0 1181 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 HMGXB4Q9UGU5 601 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 GTF3C3Q9Y5Q9 886 aa18.39■□□□□ 0.53
PPP1CA-210ENST00000542876 KIAA1549LQ6ZVL6 1849 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 MYO16Q9Y6X6 1858 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 NEDD8-MDP1E9PL57 170 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 CDX4O14627 284 aaPredicted RBP18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 GIPC1O14908 333 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 TBX18O95935 607 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 HLA-DRAP01903 254 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 PTGER3P43115 390 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 ASPAP45381 313 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 MAP7D1Q3KQU3 841 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 SPOPLQ6IQ16 392 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 SLC36A4Q6YBV0 504 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 CHPFQ8IZ52 775 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 CCDC150Q8NCX0 1101 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 JAKMIP2Q96AA8 810 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 HNRNPABQ99729 332 aaKnown RBP18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 NT5C1AQ9BXI3 368 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 CYLDQ9NQC7 956 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 MBD1Q9UIS9 605 aaPredicted RBP18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 SCML2Q9UQR0 700 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 STARD13Q9Y3M8 1113 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 CEP295Q9C0D2 2601 aa18.38■□□□□ 0.53
PPP1CA-210ENST00000542876 ACO1P21399 889 aaKnown RBP18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 HOXD12P35452 270 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 WASP42768 502 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 MAPK8P45983 427 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 VAMP7P51809 220 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 ATXN3P54252 364 aaPredicted RBP18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 RPL6Q02878 288 aaKnown RBP18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 FOXC1Q12948 553 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 TPGS1Q6ZTW0 290 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 TADA2BQ86TJ2 420 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 FRMD1Q8N878 549 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 WBP2Q969T9 261 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 CYFIP2Q96F07 1278 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 KLF16Q9BXK1 252 aaPredicted RBP18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 SLC32A1Q9H598 525 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 CYP3A43Q9HB55 503 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 PCDHA5Q9Y5H7 936 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 LAMA1P25391 3075 aa18.37■□□□□ 0.53
PPP1CA-210ENST00000542876 A0A1B0GVL5 298 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 MAPK13O15264 365 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 CYP26A1O43174 497 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 ZNF217O75362 1048 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 CFIP05156 583 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 KRT13P13646 458 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 TYRP14679 529 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 PFKFB1P16118 471 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 CMA1P23946 247 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 PGFP49763 221 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 INCA1Q0VD86 236 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 C10orf120Q5SQS8 335 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 CLEC20AQ6ZU45 233 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 INTS8Q75QN2 995 aaKnown RBP18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 RABEPKQ7Z6M1 372 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 CEP76Q8TAP6 659 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 PNPLA8Q9NP80 782 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 TMEM74BQ9NUR3 256 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 MARK1Q9P0L2 795 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 CALCOCO1Q9P1Z2 691 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 DNMT3LQ9UJW3 386 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 TRAF3IP3Q9Y228 551 aa18.36■□□□□ 0.53
PPP1CA-210ENST00000542876 THADAQ6YHU6 1953 aa18.35■□□□□ 0.53
PPP1CA-210ENST00000542876 ATXN2Q99700 1313 aaKnown RBP18.35■□□□□ 0.53
PPP1CA-210ENST00000542876 USP24Q9UPU5 2620 aa18.35■□□□□ 0.53
PPP1CA-210ENST00000542876 TRIM24O15164 1050 aa18.35■□□□□ 0.53
PPP1CA-210ENST00000542876 CACNG3O60359 315 aa18.35■□□□□ 0.53
PPP1CA-210ENST00000542876 RARGP13631 454 aa18.35■□□□□ 0.53
PPP1CA-210ENST00000542876 ENGP17813 658 aa18.35■□□□□ 0.53
PPP1CA-210ENST00000542876 GABRG2P18507 467 aa18.35■□□□□ 0.53
PPP1CA-210ENST00000542876 ITPKAP23677 461 aa18.35■□□□□ 0.53
PPP1CA-210ENST00000542876 NR2F2P24468 414 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms