RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ELF2Q15723 593 aa29.09■■■□□ 2.25
CCM2-218ENST00000541586 EFHBQ8N7U6 833 aa29.09■■■□□ 2.25
CCM2-218ENST00000541586 SMARCD1Q96GM5 515 aa29.09■■■□□ 2.25
CCM2-218ENST00000541586 FUBP3Q96I24 572 aaKnown RBP eCLIP29.09■■■□□ 2.25
CCM2-218ENST00000541586 PLEKHA4Q9H4M7 779 aa29.09■■■□□ 2.25
CCM2-218ENST00000541586 TMEM30AQ9NV96 361 aa29.09■■■□□ 2.25
CCM2-218ENST00000541586 CLDND1Q9NY35 253 aa29.09■■■□□ 2.25
CCM2-218ENST00000541586 TTC7AQ9ULT0 858 aaPredicted RBP29.09■■■□□ 2.25
CCM2-218ENST00000541586 GRAP2O75791 330 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 CACNA2D1P54289 1103 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 DDR2Q16832 855 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 CC2D1AQ6P1N0 951 aaPredicted RBP29.08■■■□□ 2.25
CCM2-218ENST00000541586 TCEAL8Q8IYN2 117 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 CLEC4CQ8WTT0 213 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 KCTD13Q8WZ19 329 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 KHSRPQ92945 711 aaKnown RBP eCLIP29.08■■■□□ 2.25
CCM2-218ENST00000541586 SPTBN5Q9NRC6 3674 aaKnown RBP29.08■■■□□ 2.25
CCM2-218ENST00000541586 PLXNA3P51805 1871 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 DYNC1I1O14576 645 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 PSTPIP1O43586 416 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 RFPL2O75678 378 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 SSR1P43307 286 aaKnown RBP29.08■■■□□ 2.25
CCM2-218ENST00000541586 TUFMP49411 452 aaKnown RBP29.08■■■□□ 2.25
CCM2-218ENST00000541586 GPR15P49685 360 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 SDHAF4Q5VUM1 108 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 CCDC149Q6ZUS6 474 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 RHOT1Q8IXI2 618 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 ZMIZ2Q8NF64 920 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 KCNK16Q96T55 309 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 DPP7Q9UHL4 492 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 SBDSQ9Y3A5 250 aaKnown RBP eCLIP29.08■■■□□ 2.25
CCM2-218ENST00000541586 XIRP2A4UGR9 3374 aa29.08■■■□□ 2.25
CCM2-218ENST00000541586 C2CD4BA6NLJ0 364 aa29.07■■■□□ 2.24
CCM2-218ENST00000541586 GLP2RO95838 553 aa29.07■■■□□ 2.24
CCM2-218ENST00000541586 HAPLN1P10915 354 aaPredicted RBP29.07■■■□□ 2.24
CCM2-218ENST00000541586 PYGMP11217 842 aa29.07■■■□□ 2.24
CCM2-218ENST00000541586 TUBB4BP68371 445 aa29.07■■■□□ 2.24
CCM2-218ENST00000541586 ADIGQ0VDE8 80 aa29.07■■■□□ 2.24
CCM2-218ENST00000541586 ADAM15Q13444 863 aa29.07■■■□□ 2.24
CCM2-218ENST00000541586 KCNC3Q14003 757 aa29.07■■■□□ 2.24
CCM2-218ENST00000541586 TRNP1Q6NT89 227 aa29.07■■■□□ 2.24
CCM2-218ENST00000541586 AADACL2Q6P093 401 aa29.07■■■□□ 2.24
CCM2-218ENST00000541586 GPR152Q8TDT2 470 aa29.07■■■□□ 2.24
CCM2-218ENST00000541586 CASP10Q92851 521 aa29.07■■■□□ 2.24
CCM2-218ENST00000541586 TCF4P15884 667 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 FLT3P36888 993 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 ALDH1A3P47895 512 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 ZNF143P52747 638 aaPredicted RBP29.06■■■□□ 2.24
CCM2-218ENST00000541586 TWF1Q12792 350 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 PPM1LQ5SGD2 360 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 C12orf76Q8N812 135 aaPredicted RBP29.06■■■□□ 2.24
CCM2-218ENST00000541586 CSNK1G1Q9HCP0 422 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 RBM12Q9NTZ6 932 aaKnown RBP29.06■■■□□ 2.24
CCM2-218ENST00000541586 MAFFQ9ULX9 164 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 FGGP02679 453 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 PDGFRAP16234 1089 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 GPD1P21695 349 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 SCNN1AP37088 669 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 SLC26A9Q7LBE3 791 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 GIPC2Q8TF65 315 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 RXFP2Q8WXD0 754 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 APOL5Q9BWW9 433 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 LRRC4Q9HBW1 653 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 INSL5Q9Y5Q6 135 aa29.06■■■□□ 2.24
CCM2-218ENST00000541586 C1RP00736 705 aa29.05■■■□□ 2.24
CCM2-218ENST00000541586 LRG1P02750 347 aa29.05■■■□□ 2.24
CCM2-218ENST00000541586 SRGAP2BP0DMP2 458 aa29.05■■■□□ 2.24
CCM2-218ENST00000541586 SEL1L2Q5TEA6 688 aa29.05■■■□□ 2.24
CCM2-218ENST00000541586 ELMSAN1Q6PJG2 1045 aa29.05■■■□□ 2.24
CCM2-218ENST00000541586 VSTM1Q6UX27 236 aa29.05■■■□□ 2.24
CCM2-218ENST00000541586 ARFGAP1Q8N6T3 406 aa29.05■■■□□ 2.24
CCM2-218ENST00000541586 STKLD1Q8NE28 680 aa29.05■■■□□ 2.24
CCM2-218ENST00000541586 UBXN6Q9BZV1 441 aa29.05■■■□□ 2.24
CCM2-218ENST00000541586 YIPF1Q9Y548 306 aa29.05■■■□□ 2.24
CCM2-218ENST00000541586 LRCH4O75427 683 aa29.04■■■□□ 2.24
CCM2-218ENST00000541586 CNPY3Q9BT09 278 aa29.04■■■□□ 2.24
CCM2-218ENST00000541586 EPC1Q9H2F5 836 aa29.04■■■□□ 2.24
CCM2-218ENST00000541586 CCDC195A0A1B0GUA6 201 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 HHLA1C9JL84 531 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 CCL16O15467 120 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 GJC1P36383 396 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 DLX2Q07687 328 aaPredicted RBP29.03■■■□□ 2.24
CCM2-218ENST00000541586 ACAP1Q15027 740 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 LRRC38Q5VT99 294 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 SIX6OS1Q8N1H7 587 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 MMGT1Q8N4V1 131 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 HDAC7Q8WUI4 952 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 HSFX1Q9UBD0 423 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 PRUNE2Q8WUY3 3088 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 ZMYND10O75800 440 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 MAGEA11P43364 429 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 TKTL1P51854 596 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 LONRF2Q1L5Z9 754 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 RAB41Q5JT25 222 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 TMC5Q6UXY8 1006 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 GPRIN1Q7Z2K8 1008 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 KATNAL2Q8IYT4 538 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 AP1M1Q9BXS5 423 aa29.03■■■□□ 2.24
CCM2-218ENST00000541586 DMAP1Q9NPF5 467 aaPredicted RBP29.03■■■□□ 2.24
CCM2-218ENST00000541586 ASNSD1Q9NWL6 643 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms