RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 MSCO60682 206 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 AVILO75366 819 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 LSM8O95777 96 aaKnown RBP9.89□□□□□ -0.83
TTC39C-203ENST00000540918 ERBB2P04626 1255 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 MX2P20592 715 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 CCND3P30281 292 aaPredicted RBP9.89□□□□□ -0.83
TTC39C-203ENST00000540918 MDH1P40925 334 aaKnown RBP9.89□□□□□ -0.83
TTC39C-203ENST00000540918 SCNN1BP51168 640 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 IRAK1P51617 712 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 OCRLQ01968 901 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 USP10Q14694 798 aaKnown RBP9.89□□□□□ -0.83
TTC39C-203ENST00000540918 NOL9Q5SY16 702 aaKnown RBP9.89□□□□□ -0.83
TTC39C-203ENST00000540918 ZNF280DQ6N043 979 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 TPGS1Q6ZTW0 290 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 AFAP1L2Q8N4X5 818 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 ARMC2Q8NEN0 867 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 CCT8L2Q96SF2 557 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 PCYT2Q99447 389 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 SIX2Q9NPC8 291 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 PLK2Q9NYY3 685 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 PAK5Q9P286 719 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 NAALADL1Q9UQQ1 740 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 COL18A1P39060 1754 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 FRMD3A2A2Y4 597 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 LRG1P02750 347 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 CD48P09326 243 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 PRLRP16471 622 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 ICAM3P32942 547 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 CRYBB1P53674 252 aaPredicted RBP9.89□□□□□ -0.83
TTC39C-203ENST00000540918 COPS2P61201 443 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 DMTNQ08495 405 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 CDH18Q13634 790 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 NAA25Q14CX7 972 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 CNGA2Q16280 664 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 ERMARDQ5T6L9 678 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 PMF1Q6P1K2 205 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 PPIL6Q8IXY8 311 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 DBF4BQ8NFT6 615 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 CLEC4CQ8WTT0 213 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 EXOC2Q96KP1 924 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 SPATA17Q96L03 361 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 FAM111AQ96PZ2 611 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 TWNKQ96RR1 684 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 IGFLR1Q9H665 355 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 KIAA1257Q9ULG3 409 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 PTPRJQ12913 1337 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 ITGB4P16144 1822 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 A0A0A6YYK5 440 aaPredicted RBP9.89□□□□□ -0.83
TTC39C-203ENST00000540918 MT-CO1P00395 513 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 URODP06132 367 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 PIRTP0C851 137 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 GOT1P17174 413 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 GJA5P36382 358 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 ELK3P41970 407 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 TUBP50607 506 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 SH3D19Q5HYK7 790 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 COLGALT1Q8NBJ5 622 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 CCDC124Q96CT7 223 aaKnown RBP9.89□□□□□ -0.83
TTC39C-203ENST00000540918 CHMP6Q96FZ7 201 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 SNRNP25Q9BV90 132 aaKnown RBP9.89□□□□□ -0.83
TTC39C-203ENST00000540918 RBM22Q9NW64 420 aaKnown RBP eCLIP9.89□□□□□ -0.83
TTC39C-203ENST00000540918 DMAC2Q9NW81 257 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 LCMT1Q9UIC8 334 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 LTBP4Q8N2S1 1624 aa9.89□□□□□ -0.83
TTC39C-203ENST00000540918 FAM47DPA6NHR8 397 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 PFDN6O15212 129 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 EDIL3O43854 480 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 VNN1O95497 513 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 LTFP02788 710 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 ESRRAP11474 423 aaPredicted RBP9.88□□□□□ -0.83
TTC39C-203ENST00000540918 LSP1P33241 339 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 PLD1Q13393 1074 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 TCEA2Q15560 299 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 CCDC142Q17RM4 750 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 TMTC4Q5T4D3 741 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 ZNF618Q5T7W0 954 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 C9orf57Q5W0N0 161 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 WDR93Q6P2C0 686 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 TBCBQ99426 244 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 SNX10Q9Y5X0 201 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 MYBPHLA2RUH7 354 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 FKTNO75072 461 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 SHBGP04278 402 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 ACRP10323 421 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 TGM2P21980 687 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 KDELR1P24390 212 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 HNRNPH3P31942 346 aaKnown RBP9.88□□□□□ -0.83
TTC39C-203ENST00000540918 CPA2P48052 419 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 FNTAP49354 379 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 ZNF268Q14587 947 aaPredicted RBP9.88□□□□□ -0.83
TTC39C-203ENST00000540918 STAT4Q14765 748 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 POM121L1PQ3SYA9 428 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 LVRNQ6Q4G3 990 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 CRLF3Q8IUI8 442 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 ZIC5Q96T25 663 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 TRIM56Q9BRZ2 755 aaKnown RBP9.88□□□□□ -0.83
TTC39C-203ENST00000540918 CIPCQ9C0C6 399 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 MPP6Q9NZW5 540 aa9.88□□□□□ -0.83
TTC39C-203ENST00000540918 TRUB2O95900 331 aaKnown RBP9.88□□□□□ -0.83
TTC39C-203ENST00000540918 INHAP05111 366 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms