RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 HIPK4Q8NE63 616 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 OR7G1Q8NGA0 311 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 GSDMBQ8TAX9 411 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 SMYD3Q9H7B4 428 aa9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 ALG13Q9NP73 1137 aaKnown RBP9.83□□□□□ -0.84
CTNNA1-243ENST00000540387 CCDC194A0A1B0GVG4 234 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 MEI4A8MW99 385 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 TGDSO95455 350 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 YWHAGP61981 247 aaKnown RBP eCLIP9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 TREML2Q5T2D2 321 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 CCSAPQ6IQ19 270 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 RNF207Q6ZRF8 634 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 FBXO11Q86XK2 927 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 TDRPQ86YL5 185 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 MCF2L2Q86YR7 1114 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 CPNE9Q8IYJ1 553 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 TSPAN14Q8NG11 270 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 HELQQ8TDG4 1101 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 C1orf54Q8WWF1 131 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 SLCO2A1Q92959 643 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 WNK4Q96J92 1243 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 HAUS8Q9BT25 410 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 AMNQ9BXJ7 453 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 THAP2Q9H0W7 228 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 C12orf65Q9H3J6 166 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 LRRC19Q9H756 370 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 BLOC1S4Q9NUP1 217 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 POU2F3Q9UKI9 436 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 DOCK1Q14185 1865 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 FAM237BA0A1B0GVD1 139 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 KRBA1A5PL33 1030 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 H3BNX3 289 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 CXCL11O14625 94 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 SORBS2O94875 1100 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 ESRRBO95718 433 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 CHEK2O96017 543 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 ABHD2P08910 425 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 ENO2P09104 434 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 CALML3P27482 149 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 PRDX6P30041 224 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 CPOXP36551 454 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 JAM2P57087 298 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 FKBP1BP68106 108 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 CAV1Q03135 178 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 PTK7Q13308 1070 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 PPIL2Q13356 520 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 PDK1Q15118 436 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 FXNQ16595 210 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 FAM20CQ8IXL6 584 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 SPERTQ8NA61 448 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 PSPC1Q8WXF1 523 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 JADE3Q92613 823 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 PPARGC1AQ9UBK2 798 aaKnown RBP9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 EBF1Q9UH73 591 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 GNPTGQ9UJJ9 305 aa9.82□□□□□ -0.84
CTNNA1-243ENST00000540387 A0A0G2JLL6 359 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 M0R2N6 131 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 LAD1O00515 517 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 XPO1O14980 1071 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 SORBS3O60504 671 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 UGT1A9O60656 530 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 GUCY1B2O75343 617 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 INHBBP09529 407 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 DLATP10515 647 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 ATF2P15336 505 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 KRT4P19013 534 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 UGT1A6P19224 532 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 UGT1A1P22309 533 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 UGT1A4P22310 534 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 UGT1A3P35503 534 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 UGT1A5P35504 534 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 GPC3P51654 580 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 LLGL1Q15334 1064 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 RGS21Q2M5E4 152 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 TIGD2Q4W5G0 525 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 C6orf52Q5T4I8 152 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 SIGIRRQ6IA17 410 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 GJB7Q6PEY0 223 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 GADL1Q6ZQY3 521 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 CATSPERGQ6ZRH7 1159 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 RFPL4BQ6ZWI9 263 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 USP43Q70EL4 1123 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 PRRT2Q7Z6L0 340 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 PRPF39Q86UA1 669 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 ITIH5Q86UX2 942 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 CPXCR1Q8N123 301 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 HSPH1Q92598 858 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 ATG4CQ96DT6 458 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 MRRFQ96E11 262 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 CALML4Q96GE6 196 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 C1orf21Q9H246 121 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 UGT1A7Q9HAW7 530 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 UGT1A10Q9HAW8 530 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 UGT1A8Q9HAW9 530 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 C6orf50Q9HD87 102 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 RABGEF1Q9UJ41 708 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 PCDHA6Q9UN73 950 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 KCNH4Q9UQ05 1017 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 PCDHA8Q9Y5H6 950 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 SCINQ9Y6U3 715 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms