RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 TIGD2Q4W5G0 525 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 TTC22Q5TAA0 569 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 FNDC7Q5VTL7 733 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 VWA1Q6PCB0 445 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 RNF207Q6ZRF8 634 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 PIK3AP1Q6ZUJ8 805 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 HEATR4Q86WZ0 1026 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 TMTC1Q8IUR5 882 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 SYNE4Q8N205 404 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 LNX2Q8N448 690 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 CXorf38Q8TB03 319 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 ABHD5Q8WTS1 349 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 SLC22A17Q8WUG5 538 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 XAGE5Q8WWM1 108 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 SOCS4Q8WXH5 440 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 TFAP2BQ92481 460 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 FUBP1Q96AE4 644 aaKnown RBP3.61□□□□□ -1.83
SNHG1-210ENST00000539303 C3orf49Q96BT1 292 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 ZSCAN31Q96LW9 406 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-210ENST00000539303 Q96MF0 132 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 TRAPPC9Q96Q05 1148 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 PRR25Q96S07 402 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 WDR11Q9BZH6 1224 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 INO80BQ9C086 356 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-210ENST00000539303 ZHX3Q9H4I2 956 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 ELAC1Q9H777 363 aaKnown RBP3.61□□□□□ -1.83
SNHG1-210ENST00000539303 ZNF703Q9H7S9 590 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-210ENST00000539303 NRDE2Q9H7Z3 1164 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 RIC8AQ9NPQ8 531 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 TESQ9UGI8 421 aaKnown RBP3.61□□□□□ -1.83
SNHG1-210ENST00000539303 CNTN6Q9UQ52 1028 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 CRYL1Q9Y2S2 319 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 PCDHB2Q9Y5E7 798 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 SETD1BQ9UPS6 1966 aaKnown RBP3.61□□□□□ -1.83
SNHG1-210ENST00000539303 COL15A1P39059 1388 aa3.61□□□□□ -1.83
SNHG1-210ENST00000539303 YY2O15391 372 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 SLC16A3O15427 465 aaKnown RBP3.6□□□□□ -1.83
SNHG1-210ENST00000539303 PRKCBP05771 671 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 EGR2P11161 476 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-210ENST00000539303 BDNFP23560 247 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 CTGFP29279 349 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 TUBP50607 506 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 CTSWP56202 376 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 ADAM17P78536 824 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 PDCLQ13371 301 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 BFSP2Q13515 415 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 TAF12Q16514 161 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 TXNRD1Q16881 649 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 TRIM60Q495X7 471 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 AASDHQ4L235 1098 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-210ENST00000539303 FBXO47Q5MNV8 452 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 JAKMIP3Q5VZ66 844 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 IGFL4Q6B9Z1 124 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 SYNE3Q6ZMZ3 975 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 RHOUQ7L0Q8 258 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 SYT13Q7L8C5 426 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 DTX2Q86UW9 622 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 LRRTM4Q86VH4 590 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 ARHGEF19Q8IW93 802 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 NRSN1Q8IZ57 195 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 TTC9BQ8N6N2 239 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 TEX19Q8NA77 164 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 IL17REQ8NFR9 667 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 SPPL3Q8TCT6 385 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 THAP4Q8WY91 577 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 DVL3Q92997 716 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-210ENST00000539303 RFKQ969G6 155 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 CTHRC1Q96CG8 243 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 COG8Q96MW5 612 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 ARHGAP39Q9C0H5 1083 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 BRD8Q9H0E9 1235 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 SAYSD1Q9NPB0 183 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 TBCCD1Q9NVR7 557 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 AURKAIP1Q9NWT8 199 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-210ENST00000539303 KCTD5Q9NXV2 234 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 MAP3K20Q9NYL2 800 aaKnown RBP3.6□□□□□ -1.83
SNHG1-210ENST00000539303 SWAP70Q9UH65 585 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 RCE1Q9Y256 329 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 TESMINQ9Y4I5 508 aa3.6□□□□□ -1.83
SNHG1-210ENST00000539303 LAS1LQ9Y4W2 734 aaKnown RBP3.6□□□□□ -1.83
SNHG1-210ENST00000539303 WDR27A2RRH5 827 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 AP4M1O00189 453 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 CTIFO43310 598 aaKnown RBP3.59□□□□□ -1.83
SNHG1-210ENST00000539303 PROM1O43490 865 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 FOXD2O60548 495 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-210ENST00000539303 PMPCBO75439 489 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 ELFN1P0C7U0 828 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 TMEM225BP0DP42 221 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 NR2F6P10588 404 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 CCR5P51681 352 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 EIF4A1P60842 406 aaKnown RBP3.59□□□□□ -1.83
SNHG1-210ENST00000539303 PSG6Q00889 435 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 E2F1Q01094 437 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 ITIH3Q06033 890 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 SF3A3Q12874 501 aaKnown RBP eCLIP3.59□□□□□ -1.836e-19■■■□□ 14.9
SNHG1-210ENST00000539303 CSHL1Q14406 222 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 RPS6KA2Q15349 733 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 MAPRE1Q15691 268 aaKnown RBP3.59□□□□□ -1.83
SNHG1-210ENST00000539303 LRRC24Q50LG9 513 aa3.59□□□□□ -1.83
SNHG1-210ENST00000539303 ATPAF1Q5TC12 328 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms