RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ZBED8Q8IZ13 594 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 PQLC3Q8N755 202 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 ANKRD42Q8N9B4 389 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 KCTD6Q8NC69 237 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 MGARPQ8TDB4 240 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 DYDC1Q8WWB3 177 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 RSAD2Q8WXG1 361 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 HSPH1Q92598 858 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 GRAMD1AQ96CP6 724 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 PLCD4Q9BRC7 762 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 TINF2Q9BSI4 451 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 GCOM2Q9BZD3 368 aaPredicted RBP9.64□□□□□ -0.87
DDB1-211ENST00000538280 RAB6CQ9H0N0 254 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 CXCL16Q9H2A7 254 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 TRABDQ9H4I3 376 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 PCDH18Q9HCL0 1135 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 SLC40A1Q9NP59 571 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 PNPLA8Q9NP80 782 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 KCNK9Q9NPC2 374 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 FGFR1OP2Q9NVK5 253 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 HAUS2Q9NVX0 235 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 NKIRAS1Q9NYS0 192 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 SAE1Q9UBE0 346 aaPredicted RBP9.64□□□□□ -0.87
DDB1-211ENST00000538280 TBK1Q9UHD2 729 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 GTF2IRD1Q9UHL9 959 aa9.64□□□□□ -0.87
DDB1-211ENST00000538280 TCRBV7S3A2A0A539 114 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 BCLAF3A2AJT9 711 aaKnown RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 CFAP69A5D8W1 941 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 SLC15A5A6NIM6 579 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 A6NJR5 290 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 HAS3O00219 553 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 CHADO15335 359 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 PAPSS1O43252 624 aaPredicted RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 SUN1O94901 812 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 IGHA2P01877 340 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 C1QAP02745 245 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 DARSP14868 501 aaKnown RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 PDGFRAP16234 1089 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 CDH6P55285 790 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 GEMIN4P57678 1058 aaKnown RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 IL9RQ01113 521 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 PLCB3Q01970 1234 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 ROR1Q01973 937 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 RNASELQ05823 741 aaKnown RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 SHHQ15465 462 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 C15orf59Q2T9L4 293 aaPredicted RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 C9orf57Q5W0N0 161 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 NUGGCQ68CJ6 796 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 PMF1Q6P1K2 205 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 NOTUMQ6P988 496 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 NPNTQ6UXI9 565 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 SPATA21Q7Z572 469 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 SESTD1Q86VW0 696 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 CRYBG2Q8N1P7 616 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 PLD5Q8N7P1 536 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 BEST2Q8NFU1 509 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 SPATA18Q8TC71 538 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 DCAKDQ8WVC6 231 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 CENPIQ92674 756 aaPredicted RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 TGS1Q96RS0 853 aaKnown RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 CDX2Q99626 313 aaPredicted RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 ZNF670Q9BS34 389 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 SNRNP25Q9BV90 132 aaKnown RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 FRMD8Q9BZ67 464 aaPredicted RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 TTYH1Q9H313 450 aaPredicted RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 C10orf88Q9H8K7 445 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 VPS37BQ9H9H4 285 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 USP29Q9HBJ7 922 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.63□□□□□ -0.87
DDB1-211ENST00000538280 SNTG2Q9NY99 539 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 PAK5Q9P286 719 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 TUBGCP4Q9UGJ1 667 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 UBQLN1Q9UMX0 589 aaKnown RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 GNEQ9Y223 722 aaKnown RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 ARL2BPQ9Y2Y0 163 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 COL4A4P53420 1690 aaPredicted RBP9.63□□□□□ -0.87
DDB1-211ENST00000538280 GBF1Q92538 1859 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 SCN1AP35498 2009 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 TRIP11Q15643 1979 aa9.63□□□□□ -0.87
DDB1-211ENST00000538280 NRCAMQ92823 1304 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 POC1B-GALNT4F8VUJ3 575 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 H0YHG0 523 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 PIRO00625 290 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 PRPSAP2O60256 369 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 BANF1O75531 89 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 SPAG6O75602 509 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 SMIM10L2AP0DMW4 78 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 SMIM10L2BP0DMW5 78 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 CYBAP13498 195 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 KCNE1P15382 129 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 ITGB8P26012 769 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 HDAC4P56524 1084 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 SNX16P57768 344 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 PDE4CQ08493 712 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 CCDC15Q0P6D6 951 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 SPARCL1Q14515 664 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 DPYSL2Q16555 572 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 PDK4Q16654 411 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 SOWAHAQ2M3V2 549 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 TRIM60Q495X7 471 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms