RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 CEP192Q8TEP8 1941 aa17.25■□□□□ 0.35
ATL3-202ENST00000535789 LAMA1P25391 3075 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 E2F8A0AVK6 867 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 XPO1O14980 1071 aaKnown RBP17.24■□□□□ 0.35
ATL3-202ENST00000535789 RNF40O75150 1001 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 PAPSS2O95340 614 aaPredicted RBP17.24■□□□□ 0.35
ATL3-202ENST00000535789 CCDC192P0DO97 292 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 VDRP11473 427 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 RARGP13631 454 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 TRIM21P19474 475 aaKnown RBP17.24■□□□□ 0.35
ATL3-202ENST00000535789 CCR3P51677 355 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 BCAT1P54687 386 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 YWHAEP62258 255 aaKnown RBP17.24■□□□□ 0.35
ATL3-202ENST00000535789 DPY19L2P1Q6NXN4 242 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 TRIM65Q6PJ69 517 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 PHTF2Q8N3S3 785 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 SUMF1Q8NBK3 374 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 RBBP8NLQ8NC74 664 aaPredicted RBP17.24■□□□□ 0.35
ATL3-202ENST00000535789 CD101Q93033 1021 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 UBXN6Q9BZV1 441 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.24■□□□□ 0.35
ATL3-202ENST00000535789 CNTN6Q9UQ52 1028 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 PCDHB4Q9Y5E5 795 aa17.24■□□□□ 0.35
ATL3-202ENST00000535789 NYNRINQ9P2P1 1898 aaKnown RBP17.24■□□□□ 0.35
ATL3-202ENST00000535789 NUP205Q92621 2012 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 PTPRZ1P23471 2315 aaPredicted RBP17.23■□□□□ 0.35
ATL3-202ENST00000535789 PAEPP09466 180 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 SLC9A1P19634 815 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 PLA2G4AP47712 749 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 SLC6A11P48066 632 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 TKTL1P51854 596 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 BST2Q10589 180 aaKnown RBP17.23■□□□□ 0.35
ATL3-202ENST00000535789 HSP90AA4PQ58FG1 418 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 MIIPQ5JXC2 388 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 LCLAT1Q6UWP7 414 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 DDX42Q86XP3 938 aaKnown RBP eCLIP17.23■□□□□ 0.35
ATL3-202ENST00000535789 ANP32EQ9BTT0 268 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 ULBP1Q9BZM6 244 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 SIX2Q9NPC8 291 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 ACP6Q9NPH0 428 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 ZSCAN32Q9NX65 697 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 NAGPAQ9UK23 515 aa17.23■□□□□ 0.35
ATL3-202ENST00000535789 BECN2A8MW95 431 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 K7EQS6 105 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 CXCL12P48061 93 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 TYRO3Q06418 890 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 ADIGQ0VDE8 80 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 GRSF1Q12849 480 aaKnown RBP eCLIP17.22■□□□□ 0.35
ATL3-202ENST00000535789 LY6G5CQ5SRR4 150 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 PM20D1Q6GTS8 502 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 KLHDC10Q6PID8 442 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 LRSAM1Q6UWE0 723 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 Q6ZNB5 142 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 ETFBKMTQ8IXQ9 262 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 SYNPOQ8N3V7 929 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 ZNF276Q8N554 614 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 SECISBP2LQ93073 1101 aaKnown RBP17.22■□□□□ 0.35
ATL3-202ENST00000535789 CLIC5Q9NZA1 410 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 PCDHGA2Q9Y5H1 932 aa17.22■□□□□ 0.35
ATL3-202ENST00000535789 CKAP5Q14008 2032 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 STC2O76061 302 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 KLKB1P03952 638 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 DRD1P21728 446 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 ATP5C1P36542 298 aaKnown RBP17.21■□□□□ 0.35
ATL3-202ENST00000535789 RGS7P49802 495 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 C10orf120Q5SQS8 335 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 PMF1Q6P1K2 205 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 HTR3DQ70Z44 454 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 CLEC4CQ8WTT0 213 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 SLC35F5Q8WV83 523 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 THAP9Q9H5L6 903 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 SAMSN1Q9NSI8 373 aaKnown RBP17.21■□□□□ 0.35
ATL3-202ENST00000535789 SH3BP1Q9Y3L3 701 aa17.21■□□□□ 0.35
ATL3-202ENST00000535789 YJEFN3A6XGL0 299 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 CHURC1-FNTBB4DL54 471 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 E7ENQ6 273 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 M0QYV0 167 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 PIK3R2O00459 728 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 SLC9A3R1O14745 358 aaPredicted RBP17.2■□□□□ 0.34
ATL3-202ENST00000535789 TRIM24O15164 1050 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 FGFR1OPO95684 399 aaKnown RBP17.2■□□□□ 0.34
ATL3-202ENST00000535789 ZBED1O96006 694 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 SETSIPP0DME0 302 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 ADH5P11766 374 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 PON1P27169 355 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 ERCC5P28715 1186 aaPredicted RBP17.2■□□□□ 0.34
ATL3-202ENST00000535789 FNTBP49356 437 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 PSEN1P49768 467 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 YWHAGP61981 247 aaKnown RBP eCLIP17.2■□□□□ 0.34
ATL3-202ENST00000535789 KDSRQ06136 332 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 CETN1Q12798 172 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 SRSF5Q13243 272 aaKnown RBP17.2■□□□□ 0.34
ATL3-202ENST00000535789 ZC3H14Q6PJT7 736 aaKnown RBP17.2■□□□□ 0.34
ATL3-202ENST00000535789 SASS6Q6UVJ0 657 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 TMEM25Q86YD3 366 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 MIB1Q86YT6 1006 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 CREBRFQ8IUR6 639 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 RPLP0P6Q8NHW5 317 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 KCTD13Q8WZ19 329 aa17.2■□□□□ 0.34
ATL3-202ENST00000535789 DNAI2Q9GZS0 605 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms