RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 KCNAB2Q13303 367 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 TMEM132AQ24JP5 1023 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 BTBD8Q5XKL5 378 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 DDX42Q86XP3 938 aaKnown RBP eCLIP8.03□□□□□ -1.12
CPSF7-214ENST00000535222 TPH2Q8IWU9 490 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 ARL14Q8N4G2 192 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 NAT16Q8N8M0 369 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 GALNT11Q8NCW6 608 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 PRCCQ92733 491 aaPredicted RBP8.03□□□□□ -1.12
CPSF7-214ENST00000535222 SKA1Q96BD8 255 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 CEP295NLQ96MC4 621 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 RPF1Q9H9Y2 349 aaKnown RBP8.03□□□□□ -1.12
CPSF7-214ENST00000535222 PLEKHA5Q9HAU0 1116 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 TMLHEQ9NVH6 421 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.03□□□□□ -1.12
CPSF7-214ENST00000535222 LRWD1Q9UFC0 647 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 FBXO10Q9UK96 956 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 DSEQ9UL01 958 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 PCDHGA4Q9Y5G9 962 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 STON1Q9Y6Q2 735 aa8.03□□□□□ -1.12
CPSF7-214ENST00000535222 DCHS2Q6V1P9 2916 aa8.02□□□□□ -1.12
CPSF7-214ENST00000535222 CKAP5Q14008 2032 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 A0A1W2PPC4 97 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 TRIM38O00635 465 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 CYP26A1O43174 497 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 SIGLEC6O43699 453 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 SLC37A4O43826 429 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 CACNG3O60359 315 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 OAS1P00973 400 aaKnown RBP8.02□□□□□ -1.13
CPSF7-214ENST00000535222 PRKCGP05129 697 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 IGHV4-34P06331 123 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 ADRB2P07550 413 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 CDC27P30260 824 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 PPP3CCP48454 512 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 BCAT1P54687 386 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 OSTNP61366 133 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 STARD3Q14849 445 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 TESK1Q15569 626 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 RTN1Q16799 776 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 DDR2Q16832 855 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 C3orf38Q5JPI3 329 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 ANKRD45Q5TZF3 282 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 SDHAF4Q5VUM1 108 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 GRAMD4Q6IC98 578 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 ADAT2Q7Z6V5 191 aaKnown RBP8.02□□□□□ -1.13
CPSF7-214ENST00000535222 DCP1BQ8IZD4 617 aaKnown RBP8.02□□□□□ -1.13
CPSF7-214ENST00000535222 TMEM130Q8N3G9 435 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 OXR1Q8N573 874 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 STKLD1Q8NE28 680 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 TSPAN18Q96SJ8 248 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 CCSER1Q9C0I3 900 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 GDF3Q9NR23 364 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 SPHK2Q9NRA0 654 aa8.02□□□□□ -1.13
CPSF7-214ENST00000535222 ABI2Q9NYB9 513 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-214ENST00000535222 THAP10Q9P2Z0 257 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-214ENST00000535222 DDX25Q9UHL0 483 aaKnown RBP8.02□□□□□ -1.13
CPSF7-214ENST00000535222 ZFC3H1O60293 1989 aaKnown RBP8.02□□□□□ -1.13
CPSF7-214ENST00000535222 TP53BP1Q12888 1972 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-214ENST00000535222 ATRQ13535 2644 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 TTC26A0AVF1 554 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 ZNF840PA6NDX5 716 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 MTSS1O43312 755 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 PRPF3O43395 683 aaKnown RBP8.01□□□□□ -1.13
CPSF7-214ENST00000535222 PRPF40AO75400 957 aaKnown RBP8.01□□□□□ -1.13
CPSF7-214ENST00000535222 THEGLP0DJG4 465 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 ACADMP11310 421 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 PRF1P14222 555 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 UQCRFS1P47985 274 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 HARS2P49590 506 aaKnown RBP8.01□□□□□ -1.13
CPSF7-214ENST00000535222 NXPH1P58417 271 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 SRSF6Q13247 344 aaKnown RBP8.01□□□□□ -1.13
CPSF7-214ENST00000535222 NFE2Q16621 373 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-214ENST00000535222 BORAQ6PGQ7 559 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 SPNS3Q6ZMD2 512 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 SYNE3Q6ZMZ3 975 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 TMEM25Q86YD3 366 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 THEM5Q8N1Q8 247 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 KRI1Q8N9T8 703 aaKnown RBP8.01□□□□□ -1.13
CPSF7-214ENST00000535222 DEPTORQ8TB45 409 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 SNX19Q92543 992 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 ERLEC1Q96DZ1 483 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 EIF2AK1Q9BQI3 630 aaKnown RBP8.01□□□□□ -1.13
CPSF7-214ENST00000535222 SLKQ9H2G2 1235 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-214ENST00000535222 USP29Q9HBJ7 922 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 MARK1Q9P0L2 795 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 CFAP97Q9P2B7 532 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 UBQLN1Q9UMX0 589 aaKnown RBP8.01□□□□□ -1.13
CPSF7-214ENST00000535222 ENTPD2Q9Y5L3 495 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 CPQQ9Y646 472 aa8.01□□□□□ -1.13
CPSF7-214ENST00000535222 LY6G6EA0A0G2JKS1 128 aa8□□□□□ -1.13
CPSF7-214ENST00000535222 A0A1B0GVM2 712 aa8□□□□□ -1.13
CPSF7-214ENST00000535222 PMS2P1A4D2B8 440 aa8□□□□□ -1.13
CPSF7-214ENST00000535222 PIRO00625 290 aa8□□□□□ -1.13
CPSF7-214ENST00000535222 PPEF2O14830 753 aa8□□□□□ -1.13
CPSF7-214ENST00000535222 SYNCRIPO60506 623 aaKnown RBP8□□□□□ -1.13
CPSF7-214ENST00000535222 USO1O60763 962 aaKnown RBP8□□□□□ -1.13
CPSF7-214ENST00000535222 SEMA4FO95754 770 aa8□□□□□ -1.13
CPSF7-214ENST00000535222 WT1P19544 449 aaPredicted RBP8□□□□□ -1.13
CPSF7-214ENST00000535222 POLE2P56282 527 aa8□□□□□ -1.13
CPSF7-214ENST00000535222 PPP2R5AQ15172 486 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms