RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 HEXIM2Q96MH2 286 aaKnown RBP14.82□□□□□ -0.04
SF3B2-215ENST00000534307 KLF16Q9BXK1 252 aaPredicted RBP14.82□□□□□ -0.04
SF3B2-215ENST00000534307 UBXN6Q9BZV1 441 aa14.82□□□□□ -0.04
SF3B2-215ENST00000534307 DNAI2Q9GZS0 605 aa14.82□□□□□ -0.04
SF3B2-215ENST00000534307 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.82□□□□□ -0.04
SF3B2-215ENST00000534307 POLR3BQ9NW08 1133 aaPredicted RBP14.82□□□□□ -0.04
SF3B2-215ENST00000534307 EML5Q05BV3 1969 aa14.82□□□□□ -0.04
SF3B2-215ENST00000534307 CCDC163A0A0D9SF12 145 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 A0A1W2PQH9 124 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 ANTXRLA6NF34 631 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 K7EQS6 105 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 CNR2P34972 360 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 EIF2DP41214 584 aaKnown RBP14.81□□□□□ -0.04
SF3B2-215ENST00000534307 MARSP56192 900 aaKnown RBP14.81□□□□□ -0.04
SF3B2-215ENST00000534307 PPM1JQ5JR12 505 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 RAB41Q5JT25 222 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 HEATR6Q6AI08 1181 aaKnown RBP14.81□□□□□ -0.04
SF3B2-215ENST00000534307 SYT13Q7L8C5 426 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 C12orf40Q86WS4 652 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 TTC30AQ86WT1 665 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 TRIM59Q8IWR1 403 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 BBS7Q8IWZ6 715 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 PHTF2Q8N3S3 785 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 ZNF276Q8N554 614 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 ANKRD52Q8NB46 1076 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 RPLP0P6Q8NHW5 317 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 SECISBP2LQ93073 1101 aaKnown RBP14.81□□□□□ -0.04
SF3B2-215ENST00000534307 CHMP5Q9NZZ3 219 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 CTNND2Q9UQB3 1225 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 PKD1L2Q7Z442 2459 aa14.81□□□□□ -0.04
SF3B2-215ENST00000534307 NBEAQ8NFP9 2946 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 SDK1Q7Z5N4 2213 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 A0A0A0MRY4 1105 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 BICDL2A1A5D9 508 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 P4HA2O15460 535 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 HOXC11O43248 304 aaPredicted RBP14.8□□□□□ -0.04
SF3B2-215ENST00000534307 ADH1CP00326 375 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 ADH5P11766 374 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 ATP5C1P36542 298 aaKnown RBP14.8□□□□□ -0.04
SF3B2-215ENST00000534307 SLC6A11P48066 632 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 PAK1Q13153 545 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 SRSF5Q13243 272 aaKnown RBP14.8□□□□□ -0.04
SF3B2-215ENST00000534307 LY6G5CQ5SRR4 150 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 HTR3DQ70Z44 454 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 PIGZQ86VD9 579 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 SFTPA1Q8IWL2 248 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 ETFBKMTQ8IXQ9 262 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 CAMKK1Q8N5S9 505 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 TRIML1Q8N9V2 468 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 USP33Q8TEY7 942 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 MED15Q96RN5 788 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 CLIC5Q9NZA1 410 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 KIAA1468Q9P260 1216 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 SH3BP1Q9Y3L3 701 aa14.8□□□□□ -0.04
SF3B2-215ENST00000534307 RARGP13631 454 aa14.79□□□□□ -0.04
SF3B2-215ENST00000534307 DSPP15924 2871 aaKnown RBP14.79□□□□□ -0.04
SF3B2-215ENST00000534307 TBXAS1P24557 533 aaPredicted RBP14.79□□□□□ -0.04
SF3B2-215ENST00000534307 PXNP49023 591 aaPredicted RBP14.79□□□□□ -0.04
SF3B2-215ENST00000534307 PSEN1P49768 467 aa14.79□□□□□ -0.04
SF3B2-215ENST00000534307 YWHAEP62258 255 aaKnown RBP14.79□□□□□ -0.04
SF3B2-215ENST00000534307 LRMPQ12912 555 aa14.79□□□□□ -0.04
SF3B2-215ENST00000534307 CCDC40Q4G0X9 1142 aa14.79□□□□□ -0.04
SF3B2-215ENST00000534307 LAIR1Q6GTX8 287 aa14.79□□□□□ -0.04
SF3B2-215ENST00000534307 BHLHA9Q7RTU4 235 aa14.79□□□□□ -0.04
SF3B2-215ENST00000534307 ACDQ96AP0 544 aa14.79□□□□□ -0.04
SF3B2-215ENST00000534307 NACA2Q9H009 215 aa14.79□□□□□ -0.04
SF3B2-215ENST00000534307 DNMT3LQ9UJW3 386 aa14.79□□□□□ -0.04
SF3B2-215ENST00000534307 TSPAN16Q9UKR8 245 aa14.79□□□□□ -0.04
SF3B2-215ENST00000534307 SLC8A2Q9UPR5 921 aa14.79□□□□□ -0.04
SF3B2-215ENST00000534307 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.79□□□□□ -0.04
SF3B2-215ENST00000534307 TULP2O00295 520 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 O00370 1275 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 SLC30A4O14863 429 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 MDM4O15151 490 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 KAT7O95251 611 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 GNA14O95837 355 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 IRF1P10914 325 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 BCAT1P54687 386 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 STX17P56962 302 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 SIM2Q14190 667 aaPredicted RBP14.78□□□□□ -0.04
SF3B2-215ENST00000534307 DMC1Q14565 340 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 LPAL2Q16609 132 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 GOLGA7BQ2TAP0 167 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 PKDCCQ504Y2 493 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 PM20D1Q6GTS8 502 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 Q6ZNB5 142 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 TMEM25Q86YD3 366 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 CCDC26Q8TAB7 109 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 KAT5Q92993 513 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 NT5C1BQ96P26 610 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 HHIPQ96QV1 700 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 PNKPQ96T60 521 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 ZSWIM1Q9BR11 485 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 SPHK2Q9NRA0 654 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 NAGPAQ9UK23 515 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 GMEB2Q9UKD1 530 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 NUDT5Q9UKK9 219 aa14.78□□□□□ -0.04
SF3B2-215ENST00000534307 AKAP13Q12802 2813 aa14.77□□□□□ -0.04
SF3B2-215ENST00000534307 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.77□□□□□ -0.05
SF3B2-215ENST00000534307 XPO1O14980 1071 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms