RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TMEM35BQ8NCS4 154 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 IRF7Q92985 503 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 WBP2Q969T9 261 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 ZFYVE19Q96K21 471 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 NOX5Q96PH1 765 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 PCDHB18PQ96TA0 734 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 FAM83CQ9BQN1 747 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 NUP58Q9BVL2 599 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 KLF16Q9BXK1 252 aaPredicted RBP12.57□□□□□ -0.4
SSBP3-214ENST00000533209 NACA2Q9H009 215 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 PDCL3Q9H2J4 239 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 C11orf16Q9NQ32 467 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 TRPV5Q9NQA5 729 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 GKN1Q9NS71 199 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 THG1LQ9NWX6 298 aaKnown RBP12.57□□□□□ -0.4
SSBP3-214ENST00000533209 WNT16Q9UBV4 365 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 DNMT3LQ9UJW3 386 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 CEP83Q9Y592 693 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 TECTAO75443 2155 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 ITIH6Q6UXX5 1313 aa12.57□□□□□ -0.4
SSBP3-214ENST00000533209 KRBA1A5PL33 1030 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 TMEM221A6NGB7 291 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 M0R296 226 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 SART1O43290 800 aaKnown RBP12.56□□□□□ -0.4
SSBP3-214ENST00000533209 LTFP02788 710 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 ERBB2P04626 1255 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 CYP1A1P04798 512 aaPredicted RBP12.56□□□□□ -0.4
SSBP3-214ENST00000533209 FYNP06241 537 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 PLCB2Q00722 1185 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 PFKPQ01813 784 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 NAA35Q5VZE5 725 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 TADA2BQ86TJ2 420 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 DDX42Q86XP3 938 aaKnown RBP eCLIP12.56□□□□□ -0.4
SSBP3-214ENST00000533209 TTC16Q8NEE8 873 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 OLIG1Q8TAK6 271 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 EDEM1Q92611 657 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 DNASE1L2Q92874 299 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 PIWIL1Q96J94 861 aaKnown RBP12.56□□□□□ -0.4
SSBP3-214ENST00000533209 CDK5RAP1Q96SZ6 601 aaKnown RBP12.56□□□□□ -0.4
SSBP3-214ENST00000533209 SYT11Q9BT88 431 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 ABCC13Q9NSE7 274 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 AIPL1Q9NZN9 384 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 CFAP97Q9P2B7 532 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 FBXL21Q9UKT6 434 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 CAPN11Q9UMQ6 739 aa12.56□□□□□ -0.4
SSBP3-214ENST00000533209 MYO16Q9Y6X6 1858 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 FAM170AA1A519 330 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 GREM1O60565 184 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 GYPCP04921 128 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 CCDC172P0C7W6 258 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 ARSAP15289 507 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 PRKCIP41743 596 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 GABRB2P47870 512 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 TNK2Q07912 1038 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 EFEMP1Q12805 493 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 ASIC2Q16515 512 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 SLC44A4Q53GD3 710 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 SFMBT2Q5VUG0 894 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 TRIM68Q6AZZ1 485 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 CC2D1AQ6P1N0 951 aaPredicted RBP12.55□□□□□ -0.4
SSBP3-214ENST00000533209 MSANTD2Q6P1R3 559 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 OLFML1Q6UWY5 402 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 TRIM72Q6ZMU5 477 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 RSRC2Q7L4I2 434 aaKnown RBP12.55□□□□□ -0.4
SSBP3-214ENST00000533209 MIB1Q86YT6 1006 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 FMNL3Q8IVF7 1028 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 VSTM4Q8IW00 320 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 SIX5Q8N196 739 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 KIAA1958Q8N8K9 716 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 IPO4Q8TEX9 1081 aaKnown RBP12.55□□□□□ -0.4
SSBP3-214ENST00000533209 OSCP1Q8WVF1 389 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 CPLX3Q8WVH0 158 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 CPA5Q8WXQ8 436 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 FAM149B1Q96BN6 582 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 IQCDQ96DY2 449 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 AGPAT1Q99943 283 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 LINC00597Q9H2U6 94 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 HPS4Q9NQG7 708 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 OLA1Q9NTK5 396 aaKnown RBP12.55□□□□□ -0.4
SSBP3-214ENST00000533209 MARCH2Q9P0N8 246 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 RASAL2Q9UJF2 1139 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 CA14Q9ULX7 337 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 WNT6Q9Y6F9 365 aa12.55□□□□□ -0.4
SSBP3-214ENST00000533209 E2F8A0AVK6 867 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 FAM86C2PA6NEL3 165 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 SHISA7A6NL88 538 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 SCAMP3O14828 347 aaKnown RBP12.54□□□□□ -0.4
SSBP3-214ENST00000533209 GPR37L1O60883 481 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 PDGFBP01127 241 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-214ENST00000533209 IRF1P10914 325 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 UNGP13051 313 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-214ENST00000533209 SNX16P57768 344 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 ZBED6P86452 979 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 PDGFRLQ15198 375 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 TAF5Q15542 800 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 MLF2Q15773 248 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-214ENST00000533209 CLEC16AQ2KHT3 1053 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 EML3Q32P44 896 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 SPECC1LQ69YQ0 1117 aa12.54□□□□□ -0.4
SSBP3-214ENST00000533209 OR6B2Q6IFH4 312 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms