RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ANKRD20A12PQ8NF67 263 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 PIP4K2CQ8TBX8 421 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 SPATA18Q8TC71 538 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 SH3RF2Q8TEC5 729 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 ZBTB45Q96K62 511 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 NAP1L5Q96NT1 182 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 CYP2S1Q96SQ9 504 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 PNKPQ96T60 521 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 XPO4Q9C0E2 1151 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 LINC00597Q9H2U6 94 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 AGPAT3Q9NRZ7 376 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 DMAC2Q9NW81 257 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 PCDHB5Q9Y5E4 795 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 PLXND1Q9Y4D7 1925 aa12.03□□□□□ -0.48
TRAPPC4-213ENST00000533149 SHROOM3Q8TF72 1996 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 DENND4CQ5VZ89 1909 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 A0A0A0MRY4 1105 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 ANKRD63C9JTQ0 380 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 E9PAM4 449 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 ZBTB24O43167 697 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 CBFA2T2O43439 604 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 ZNF217O75362 1048 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 APODP05090 189 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 NR2F2P24468 414 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 EEF1GP26641 437 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 EIF2DP41214 584 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 TNFRSF4P43489 277 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 MTIF2P46199 727 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 PDE6CP51160 858 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 CDR1P51861 262 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 MCL1Q07820 350 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 KRT31Q15323 416 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 SYCP2LQ5T4T6 812 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 ZPBP2Q6X784 338 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 TMEM130Q8N3G9 435 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 KIAA1958Q8N8K9 716 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 KCNV2Q8TDN2 545 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 SETD7Q8WTS6 366 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 TRMT2BQ96GJ1 504 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 MYRFLQ96LU7 910 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 CDC6Q99741 560 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 PI4K2AQ9BTU6 479 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 PRORYQ9H606 182 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 TAB2Q9NYJ8 693 aa12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 CGNQ9P2M7 1197 aaKnown RBP12.02□□□□□ -0.49
TRAPPC4-213ENST00000533149 ANTXRLA6NF34 631 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 TISP43B9A030 160 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 ADAM23O75077 832 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 DKK1O94907 266 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 KAT7O95251 611 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 GNA14O95837 355 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 GRIA2P42262 883 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 MATR3P43243 847 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 KIR2DL1P43626 348 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 CYP2J2P51589 502 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 COPB1P53618 953 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 RPL10AP62906 217 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 NR1I3Q14994 352 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 NFE2Q16621 373 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 CCDC40Q4G0X9 1142 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 FILIP1LQ4L180 1135 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 CEP135Q66GS9 1140 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 LRRC69Q6ZNQ3 347 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 TRMT11Q7Z4G4 463 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 LRRTM3Q86VH5 581 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 SLC9A9Q8IVB4 645 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 SLC41A1Q8IVJ1 513 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 C12orf56Q8IXR9 622 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 RGL4Q8IZJ4 473 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 BICD1Q96G01 975 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 MRFAP1L1Q96HT8 127 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 HSPA12BQ96MM6 686 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 SLC22A12Q96S37 553 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 PPP1R9BQ96SB3 815 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 TUBGCP2Q9BSJ2 902 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 VPS16Q9H269 839 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 PCIF1Q9H4Z3 704 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 RTN4Q9NQC3 1192 aaKnown RBP12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 GCNT4Q9P109 453 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 ARHGAP26Q9UNA1 814 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 PTPRBP23467 1997 aa12.01□□□□□ -0.49
TRAPPC4-213ENST00000533149 GON4LQ3T8J9 2241 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 A0A1B0GTH6 734 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 LACTBL1A8MY62 500 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-213ENST00000533149 SLC9A3R1O14745 358 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-213ENST00000533149 PPEF2O14830 753 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 TADA3O75528 432 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 NOL4O94818 638 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 PIGRP01833 764 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 ZNF883P0CG24 379 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
TRAPPC4-213ENST00000533149 HDCP19113 662 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 ADSSP30520 456 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 CASP4P49662 377 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 GUCY2FP51841 1108 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 CCDC173Q0VFZ6 552 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 GRIK2Q13002 908 aa12□□□□□ -0.49
TRAPPC4-213ENST00000533149 CAMK2BQ13554 666 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms