RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 TBX18O95935 607 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 VIPP01282 170 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 TK1P04183 234 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 ANXA6P08133 673 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 JUPP14923 745 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 MST1P26927 711 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 MCM7P33993 719 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 PTGS2P35354 604 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 NR1H2P55055 460 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 ABHD18Q0P651 414 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 PRKG2Q13237 762 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 FHL3Q13643 280 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 TUBA3CQ13748 450 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 CYP2A13Q16696 494 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 ZNF750Q32MQ0 723 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 ITPRIPL1Q6GPH6 555 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 TUBA3EQ6PEY2 450 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 LAYNQ6UX15 382 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 TMEM108Q6UXF1 575 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 RRAGAQ7L523 313 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 RAB11FIP2Q7L804 512 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 TMPRSS9Q7Z410 1059 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 TTC30AQ86WT1 665 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 TMEM132CQ8N3T6 1108 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 TCP11L2Q8N4U5 519 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 TMEM57Q8N5G2 664 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 UCMAQ8WVF2 138 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 ASB10Q8WXI3 467 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 LPIN2Q92539 896 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 GOLGA1Q92805 767 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 LENG9Q96B70 501 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 ERP27Q96DN0 273 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 TRIM44Q96DX7 344 aaPredicted RBP3.71□□□□□ -1.82
CD44-229ENST00000528672 RRP36Q96EU6 259 aaKnown RBP3.71□□□□□ -1.82
CD44-229ENST00000528672 ZBTB45Q96K62 511 aaPredicted RBP3.71□□□□□ -1.82
CD44-229ENST00000528672 DCLRE1CQ96SD1 692 aaKnown RBP3.71□□□□□ -1.82
CD44-229ENST00000528672 SMOQ99835 787 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 BRD8Q9H0E9 1235 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 SLC25A32Q9H2D1 315 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 PREBQ9HCU5 417 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 AKIP1Q9NQ31 210 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 OLA1Q9NTK5 396 aaKnown RBP3.71□□□□□ -1.82
CD44-229ENST00000528672 TMEM160Q9NX00 188 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 AASSQ9UDR5 926 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 SHOC2Q9UQ13 582 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 HPSEQ9Y251 543 aa3.71□□□□□ -1.82
CD44-229ENST00000528672 SETD1BQ9UPS6 1966 aaKnown RBP3.71□□□□□ -1.82
CD44-229ENST00000528672 CENPVL1A0A0U1RR11 272 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 PCDH17O14917 1159 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 ERN1O75460 977 aaKnown RBP3.7□□□□□ -1.82
CD44-229ENST00000528672 KRT38O76015 456 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 ATXN1LP0C7T5 689 aaKnown RBP3.7□□□□□ -1.82
CD44-229ENST00000528672 SPATA31D3P0C874 917 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 PEPDP12955 493 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 HGFP14210 728 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 MAKP20794 623 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 KLRK1P26718 216 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 LRPAP1P30533 357 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 SLC5A2P31639 672 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 AKT1P31749 480 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 CCR5P51681 352 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 HMGA2P52926 109 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 NAP1L1P55209 391 aaKnown RBP3.7□□□□□ -1.82
CD44-229ENST00000528672 CXADRP78310 365 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 NUCB1Q02818 461 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 CHRNDQ07001 517 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 PIGFQ07326 219 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 EIF2B5Q13144 721 aaKnown RBP3.7□□□□□ -1.82
CD44-229ENST00000528672 ATP1A4Q13733 1029 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 RPS6KA2Q15349 733 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 NBPF8Q3BBV2 869 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 GPATCH4Q5T3I0 446 aaKnown RBP3.7□□□□□ -1.82
CD44-229ENST00000528672 MANEALQ5VSG8 457 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 SPATA1Q5VX52 437 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 RINT1Q6NUQ1 792 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 ARMC6Q6NXE6 501 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 NFRKBQ6P4R8 1299 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 SPATA31D4Q6ZUB0 917 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 GPR149Q86SP6 731 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 EGFL6Q8IUX8 553 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 VRK3Q8IV63 474 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 ADGRG5Q8IZF4 528 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 Q8N1X5 172 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 OTUD6BQ8N6M0 293 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 CPEB3Q8NE35 698 aaKnown RBP3.7□□□□□ -1.82
CD44-229ENST00000528672 NGDNQ8NEJ9 315 aaKnown RBP3.7□□□□□ -1.82
CD44-229ENST00000528672 CEP70Q8NHQ1 597 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 BPIFB1Q8TDL5 484 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 NUP133Q8WUM0 1156 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 WDR60Q8WVS4 1066 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 RFFLQ8WZ73 363 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 CENPIQ92674 756 aaPredicted RBP3.7□□□□□ -1.82
CD44-229ENST00000528672 PPP2R3CQ969Q6 453 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 C3orf49Q96BT1 292 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 FAM227BQ96M60 508 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 ZNF830Q96NB3 372 aaPredicted RBP3.7□□□□□ -1.82
CD44-229ENST00000528672 PLEKHG4BQ96PX9 1271 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 BARD1Q99728 777 aaKnown RBP3.7□□□□□ -1.82
CD44-229ENST00000528672 PRRX2Q99811 253 aa3.7□□□□□ -1.82
CD44-229ENST00000528672 SLC46A2Q9BY10 475 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms