RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 TBC1D13Q9NVG8 400 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 PCDH10Q9P2E7 1040 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 DNAJB4Q9UDY4 337 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 OGDHLQ9ULD0 1010 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 LRFN2Q9ULH4 789 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 SNX24Q9Y343 169 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 PDCD11Q14690 1871 aaKnown RBP8.05□□□□□ -1.12
SOX6-211ENST00000528429 KIAA0100Q14667 2235 aaKnown RBP8.05□□□□□ -1.12
SOX6-211ENST00000528429 SYNJ2BP-COX16A0A087WUM0 186 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 XPO1O14980 1071 aaKnown RBP8.05□□□□□ -1.12
SOX6-211ENST00000528429 PRPSAP2O60256 369 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 CD48P09326 243 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 TFE3P19532 575 aaPredicted RBP8.05□□□□□ -1.12
SOX6-211ENST00000528429 CYP2C18P33260 490 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 PLA2G4AP47712 749 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 NDUFV1P49821 464 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 TLE2Q04725 743 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 DHX34Q14147 1143 aaKnown RBP8.05□□□□□ -1.12
SOX6-211ENST00000528429 GPNMBQ14956 572 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 OVOS1Q6IE37 1185 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 CLEC20AQ6ZU45 233 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 PAQR9Q6ZVX9 377 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 FAM35AQ86V20 835 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 DIS3LQ8TF46 1054 aaKnown RBP8.05□□□□□ -1.12
SOX6-211ENST00000528429 STK32AQ8WU08 396 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 FAM172AQ8WUF8 416 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 MAIP1Q8WWC4 291 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 SEPT8Q92599 483 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 CLIP3Q96DZ5 547 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 ERP44Q9BS26 406 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.05□□□□□ -1.12
SOX6-211ENST00000528429 GPATCH2LQ9NWQ4 482 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 DDX56Q9NY93 547 aaKnown RBP8.05□□□□□ -1.12
SOX6-211ENST00000528429 COX16Q9P0S2 106 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 HCSTQ9UBK5 93 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 ATP11BQ9Y2G3 1177 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 PCDHB7Q9Y5E2 793 aa8.05□□□□□ -1.12
SOX6-211ENST00000528429 DCDC2CA8MYV0 355 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 MAP2K7O14733 419 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 UPP2O95045 317 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 DESP17661 470 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 ACADSBP45954 432 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 TKTL1P51854 596 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 CACNA2D1P54289 1103 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 PLCB3Q01970 1234 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 IFRD2Q12894 506 aaPredicted RBP8.04□□□□□ -1.12
SOX6-211ENST00000528429 KLF1Q13351 362 aaPredicted RBP8.04□□□□□ -1.12
SOX6-211ENST00000528429 CUL1Q13616 776 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 TOMM20Q15388 145 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 TRIM60Q495X7 471 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 CCDC14Q49A88 953 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 TFDP3Q5H9I0 405 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 TTC39BQ5VTQ0 682 aaPredicted RBP8.04□□□□□ -1.12
SOX6-211ENST00000528429 EMBQ6PCB8 327 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 DCLRE1AQ6PJP8 1040 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 PACS1Q6VY07 963 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 GSTA5Q7RTV2 222 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 POLNQ7Z5Q5 900 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 CTU1Q7Z7A3 348 aaKnown RBP8.04□□□□□ -1.12
SOX6-211ENST00000528429 SRLQ86TD4 932 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 MYLPFQ96A32 169 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 CENPTQ96BT3 561 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 PEBP4Q96S96 227 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 TMEM209Q96SK2 561 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 DCLK3Q9C098 648 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 NEUROG2Q9H2A3 272 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 SPATS2LQ9NUQ6 558 aaKnown RBP8.04□□□□□ -1.12
SOX6-211ENST00000528429 TMEM161AQ9NX61 479 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 WBP1LQ9NX94 342 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 SAE1Q9UBE0 346 aaPredicted RBP8.04□□□□□ -1.12
SOX6-211ENST00000528429 ASIC3Q9UHC3 531 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 CDH9Q9ULB4 789 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 hCG_2014768A0A024R1R8 64 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 hCG_1818297A0A087WSY0 165 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 FAM187AA6NFU0 413 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 PITPNM1O00562 1244 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 ENPP3O14638 875 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 ATP8B1O43520 1251 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 TJP3O95049 919 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 SNUPNO95149 360 aaKnown RBP8.04□□□□□ -1.12
SOX6-211ENST00000528429 OR4Q2P0C623 313 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 TCF3P15923 654 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 TNFRSF8P28908 595 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 PBX3P40426 434 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 CDKN2BP42772 138 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 PTGIRP43119 386 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 FNTAP49354 379 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 AARSP49588 968 aaKnown RBP eCLIP8.04□□□□□ -1.123e-6■■■■■ 61.8
SOX6-211ENST00000528429 ATXN1P54253 815 aaKnown RBP8.04□□□□□ -1.12
SOX6-211ENST00000528429 PLTPP55058 493 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 CDH6P55285 790 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 KRT17Q04695 432 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 MMRN1Q13201 1228 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 MPP3Q13368 585 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 CYP1B1Q16678 543 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 TCTN1Q2MV58 587 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 PLEKHG4Q58EX7 1191 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 DCAF6Q58WW2 860 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 CD300LGQ6UXG3 332 aa8.04□□□□□ -1.12
SOX6-211ENST00000528429 SLC26A9Q7LBE3 791 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms