RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 SRRM1Q8IYB3 904 aaKnown RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 SPARTQ8N0X7 666 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 CARNMT1Q8N4J0 409 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ZNF713Q8N859 430 aaPredicted RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ANKRD44Q8N8A2 993 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 C9orf106Q8NAJ2 232 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 APPL2Q8NEU8 664 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 TNIP2Q8NFZ5 429 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 LINS1Q8NG48 757 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ZNF473Q8WTR7 871 aaKnown RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ATRIPQ8WXE1 791 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 COG3Q96JB2 828 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 CLMNQ96JQ2 1002 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 CCDC42Q96M95 316 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 GPR101Q96P66 508 aaPredicted RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 PSKH2Q96QS6 385 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 SRPK1Q96SB4 655 aaKnown RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 GMLQ99445 158 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 PRPF18Q99633 342 aaKnown RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 HGH1Q9BTY7 390 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 TIPINQ9BVW5 301 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 LSM14BQ9BX40 385 aaKnown RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 XPO4Q9C0E2 1151 aaKnown RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 PITHD1Q9GZP4 211 aaPredicted RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 GBA3Q9H227 469 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 CARD9Q9H257 536 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ATP8A2Q9NTI2 1148 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 HAUS2Q9NVX0 235 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 RHBDL2Q9NX52 303 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 HERC5Q9UII4 1024 aaKnown RBP3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 ZNF180Q9UJW8 692 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 HPCAL4Q9UM19 191 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 SLC45A1Q9Y2W3 748 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 LRRC42Q9Y546 428 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 NPHP3Q7Z494 1330 aa3.95□□□□□ -1.78
CLNS1A-209ENST00000527299 PLA2R1Q13018 1463 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 ARHGAP35Q9NRY4 1499 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 WDR7Q9Y4E6 1490 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 PLEKHG1Q9ULL1 1385 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 A0A0J9YVX5 310 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 KIF28PB7ZC32 967 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 E9PMD0 336 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 DVL2O14641 736 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 HAT1O14929 419 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 STRNO43815 780 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 KPNA6O60684 536 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 TACC1O75410 805 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 LCA5LO95447 670 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 ITGA2BP08514 1039 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 FAM153BP0C7A2 387 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 PCP11498 1178 aaKnown RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 SCG2P13521 617 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 ATP6V1C1P21283 382 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 PLA2G5P39877 138 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 TSPAN7P41732 249 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 LIFRP42702 1097 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 HPCAP84074 193 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 SSRP1Q08945 709 aaKnown RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 RASGRF1Q13972 1273 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 E2F2Q14209 437 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 TNIP1Q15025 636 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 TAF11Q15544 211 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 MAN2A1Q16706 1144 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 C15orf59Q2T9L4 293 aaPredicted RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 P3H1Q32P28 736 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 ARL13BQ3SXY8 428 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 TRIM61Q5EBN2 209 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 SPECC1Q5M775 1068 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 NDUFAF5Q5TEU4 345 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 ABHD17BQ5VST6 288 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 SYDE2Q5VT97 1194 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 PRAMEF9Q5VWM5 478 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 OR52E8Q6IFG1 317 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 DOK3Q7L591 496 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 PHLDB2Q86SQ0 1253 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 C14orf80Q86SX3 495 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 PLXDC1Q8IUK5 500 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 CCDC146Q8IYE0 955 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 COG1Q8WTW3 980 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 SMG7Q92540 1137 aaKnown RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 SGCDQ92629 289 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 RPGRQ92834 1020 aaKnown RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 IL17RAQ96F46 866 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 SCLYQ96I15 445 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 HIC2Q96JB3 615 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 MAELQ96JY0 434 aaKnown RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 MAGEB10Q96LZ2 347 aaPredicted RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 CEP295NLQ96MC4 621 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 GDAP1L1Q96MZ0 367 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 KRTAP1-5Q9BYS1 174 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 NSRP1Q9H0G5 558 aaKnown RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 NUP62CLQ9H1M0 184 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 NDST4Q9H3R1 872 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 TPK1Q9H3S4 243 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 C12orf10Q9HB07 376 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 PFDN4Q9NQP4 134 aa3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 DDX19AQ9NUU7 478 aaKnown RBP3.94□□□□□ -1.78
CLNS1A-209ENST00000527299 FAIMQ9NVQ4 179 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms