RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 VRTNQ9H8Y1 702 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 KIF9Q9HAQ2 790 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 APOBEC3GQ9HC16 384 aaKnown RBP11.62□□□□□ -0.55
NEDD8-204ENST00000526430 TMEM8AQ9HCN3 771 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 POLMQ9NP87 494 aaPredicted RBP11.62□□□□□ -0.55
NEDD8-204ENST00000526430 HSFX1Q9UBD0 423 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 ITGA11Q9UKX5 1188 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 NUB1Q9Y5A7 615 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 PCDHB9Q9Y5E1 797 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 KCNJ18B7U540 433 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 GJB3O75712 270 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 OAZ2O95190 189 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 ASS1P00966 412 aaKnown RBP11.61□□□□□ -0.55
NEDD8-204ENST00000526430 HLA-DRAP01903 254 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 TMEM191BP0C7N4 346 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 KRT13P13646 458 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 FMO5P49326 533 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 AP3M2P53677 418 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 RBP5P82980 135 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 KCNMA1Q12791 1236 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 DUSP4Q13115 394 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 GPR17Q13304 367 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 KCNJ12Q14500 433 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 TRIM68Q6AZZ1 485 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 LUZP1Q86V48 1076 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 TMEFF1Q8IYR6 380 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 CMTM8Q8IZV2 173 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 CPA6Q8N4T0 437 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 LRRC52Q8N7C0 313 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 PNPLA1Q8N8W4 532 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 USP33Q8TEY7 942 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 ANKRD36BP1Q96IX9 119 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 PI4K2AQ9BTU6 479 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 GDAP2Q9NXN4 497 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 LIMA1Q9UHB6 759 aaKnown RBP11.61□□□□□ -0.55
NEDD8-204ENST00000526430 MMP17Q9ULZ9 603 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 PCDHB8Q9UN66 801 aa11.61□□□□□ -0.55
NEDD8-204ENST00000526430 MYLKQ15746 1914 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 KPNA7A9QM74 516 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 ARHGAP6O43182 974 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 MAP3K13O43283 966 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 XPOTO43592 962 aaKnown RBP11.6□□□□□ -0.55
NEDD8-204ENST00000526430 HCRTO43612 131 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 SH3BP5O60239 455 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 ALDH1A2O94788 518 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 TNNC2P02585 160 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 ARSAP15289 507 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 ITPKAP23677 461 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 CYP4F8P98187 520 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 NCOA4Q13772 614 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 BYSLQ13895 437 aaKnown RBP11.6□□□□□ -0.55
NEDD8-204ENST00000526430 KRT31Q15323 416 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 CRY1Q16526 586 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 SOWAHAQ2M3V2 549 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 CCDC40Q4G0X9 1142 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 NAIF1Q69YI7 327 aaPredicted RBP11.6□□□□□ -0.55
NEDD8-204ENST00000526430 KRT39Q6A163 491 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 SPOPLQ6IQ16 392 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 ARMCX6Q7L4S7 300 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 NAXDQ8IW45 347 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 WHAMMQ8TF30 809 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 TATDN2Q93075 761 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 HPDLQ96IR7 371 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 SENP8Q96LD8 212 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 CAMK1GQ96NX5 476 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 GCNAQ96QF7 691 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 SLC46A2Q9BY10 475 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 SMG9Q9H0W8 520 aaKnown RBP11.6□□□□□ -0.55
NEDD8-204ENST00000526430 SDCBP2Q9H190 292 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 PRORYQ9H606 182 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 CLMPQ9H6B4 373 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 IL21Q9HBE4 155 aa11.6□□□□□ -0.55
NEDD8-204ENST00000526430 TIMM13Q9Y5L4 95 aaPredicted RBP11.6□□□□□ -0.55
NEDD8-204ENST00000526430 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.6□□□□□ -0.55
NEDD8-204ENST00000526430 ATXN2Q99700 1313 aaKnown RBP11.6□□□□□ -0.55
NEDD8-204ENST00000526430 OR6C75A6NL08 312 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 GABRDO14764 452 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 CAPN9O14815 690 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 DKK1O94907 266 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 FGFR1OPO95684 399 aaKnown RBP11.59□□□□□ -0.55
NEDD8-204ENST00000526430 CYP11A1P05108 521 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 SYPP08247 313 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 KRT19P08727 400 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 DDX6P26196 483 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■■□□ 15.5
NEDD8-204ENST00000526430 AVPR1AP37288 418 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 TAF6P49848 677 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 APBA1Q02410 837 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 YWHAHQ04917 246 aaPredicted RBP11.59□□□□□ -0.55
NEDD8-204ENST00000526430 ZNF268Q14587 947 aaPredicted RBP11.59□□□□□ -0.55
NEDD8-204ENST00000526430 VWA3BQ502W6 1294 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 DCAF17Q5H9S7 520 aaPredicted RBP11.59□□□□□ -0.55
NEDD8-204ENST00000526430 CC2D1AQ6P1N0 951 aaPredicted RBP11.59□□□□□ -0.55
NEDD8-204ENST00000526430 SLCO6A1Q86UG4 719 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 OSTM1Q86WC4 334 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 EHBP1Q8NDI1 1231 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 KBTBD7Q8WVZ9 684 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 USP13Q92995 863 aaPredicted RBP11.59□□□□□ -0.55
NEDD8-204ENST00000526430 PGLYRP2Q96PD5 576 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms