RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 CFIP05156 583 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 CENPBP07199 599 aaPredicted RBP11.3□□□□□ -0.6
VPS26B-203ENST00000525918 SERPINF2P08697 491 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 P4HA1P13674 534 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 HOXB2P14652 356 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 CASP1P29466 404 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 ATP5C1P36542 298 aaKnown RBP11.3□□□□□ -0.6
VPS26B-203ENST00000525918 ATXN3P54252 364 aaPredicted RBP11.3□□□□□ -0.6
VPS26B-203ENST00000525918 GFPT1Q06210 699 aaPredicted RBP11.3□□□□□ -0.6
VPS26B-203ENST00000525918 SEMA3BQ13214 749 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 NCOA4Q13772 614 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 SGSM1Q2NKQ1 1148 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 GRAMD4Q6IC98 578 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 SDE2Q6IQ49 451 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 RABEPKQ7Z6M1 372 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 CRYBG2Q8N1P7 616 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 ZMIZ2Q8NF64 920 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 PLEKHO2Q8TD55 490 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 TMEM174Q8WUU8 243 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 WBP2Q969T9 261 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 XPO6Q96QU8 1125 aaKnown RBP11.3□□□□□ -0.6
VPS26B-203ENST00000525918 SMOQ99835 787 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
VPS26B-203ENST00000525918 SDCBP2Q9H190 292 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 CSNK1G1Q9HCP0 422 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 TLR8Q9NR97 1041 aaKnown RBP11.3□□□□□ -0.6
VPS26B-203ENST00000525918 KRT82Q9NSB4 513 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 WDR35Q9P2L0 1181 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 PCDH15Q96QU1 1955 aa11.3□□□□□ -0.6
VPS26B-203ENST00000525918 ATXN2Q99700 1313 aaKnown RBP11.3□□□□□ -0.6
VPS26B-203ENST00000525918 A0A1W2PQF6 199 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 K7ELQ4 463 aaPredicted RBP11.29□□□□□ -0.6
VPS26B-203ENST00000525918 TRIM24O15164 1050 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 CACNG3O60359 315 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 GREM1O60565 184 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 GABBR2O75899 941 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 BEST1O76090 585 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 VNN1O95497 513 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 RPN1P04843 607 aaKnown RBP11.29□□□□□ -0.6
VPS26B-203ENST00000525918 IRF1P10914 325 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 TRIM21P19474 475 aaKnown RBP11.29□□□□□ -0.6
VPS26B-203ENST00000525918 AFMP43652 599 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 PGFP49763 221 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 MAP3K7CLP57077 242 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 ZNF33AQ06730 810 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 GOLGA8FQ08AF8 430 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 GOLGA8DPQ0D2H9 430 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 CUL4BQ13620 913 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 SCARA5Q6ZMJ2 495 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 PIP4P1Q86T03 277 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 UNC93AQ86WB7 457 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 CHPFQ8IZ52 775 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 HDDC3Q8N4P3 179 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 SLC2A14Q8TDB8 520 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 TAF4BQ92750 862 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 GATA6Q92908 595 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 BBS2Q9BXC9 721 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 KLF16Q9BXK1 252 aaPredicted RBP11.29□□□□□ -0.6
VPS26B-203ENST00000525918 CYLDQ9NQC7 956 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 DNAJC17Q9NVM6 304 aaKnown RBP11.29□□□□□ -0.6
VPS26B-203ENST00000525918 FAM13BQ9NYF5 915 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 CALCOCO1Q9P1Z2 691 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 LSM7Q9UK45 103 aaKnown RBP11.29□□□□□ -0.6
VPS26B-203ENST00000525918 HCN2Q9UL51 889 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 NEUROG3Q9Y4Z2 214 aa11.29□□□□□ -0.6
VPS26B-203ENST00000525918 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.28□□□□□ -0.6
VPS26B-203ENST00000525918 IGHV1OR15-9A0A0B4J2B8 117 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 NEDD8-MDP1E9PL57 170 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 IKBKBO14920 756 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 OPHN1O60890 802 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 TBX18O95935 607 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 PDIA4P13667 645 aaKnown RBP11.28□□□□□ -0.6
VPS26B-203ENST00000525918 CCDC130P13994 396 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 TYRP14679 529 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 RDXP35241 583 aaKnown RBP11.28□□□□□ -0.6
VPS26B-203ENST00000525918 WASP42768 502 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 NDST1P52848 882 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 SIM1P81133 766 aaPredicted RBP11.28□□□□□ -0.6
VPS26B-203ENST00000525918 ZACNQ401N2 412 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 EGFLAMQ63HQ2 1017 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 TPGS1Q6ZTW0 290 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 MIB1Q86YT6 1006 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 SLC9A9Q8IVB4 645 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 DEFB119Q8N690 84 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 C12orf29Q8N999 325 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 IPO4Q8TEX9 1081 aaKnown RBP11.28□□□□□ -0.6
VPS26B-203ENST00000525918 ELMO3Q96BJ8 720 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 ACOX2Q99424 681 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 GABRG3Q99928 467 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 GTPBP2Q9BX10 602 aaKnown RBP11.28□□□□□ -0.6
VPS26B-203ENST00000525918 CAPN10Q9HC96 672 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 CD248Q9HCU0 757 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.28□□□□□ -0.6
VPS26B-203ENST00000525918 DMAC2Q9NW81 257 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 MARK1Q9P0L2 795 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 RALYQ9UKM9 306 aaKnown RBP11.28□□□□□ -0.6
VPS26B-203ENST00000525918 PCDHA7Q9UN72 937 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 SCML2Q9UQR0 700 aa11.28□□□□□ -0.6
VPS26B-203ENST00000525918 AKAP13Q12802 2813 aa11.27□□□□□ -0.6
VPS26B-203ENST00000525918 A0A1W2PQD8 194 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms