RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 NT5C1BQ96P26 610 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 HHIPQ96QV1 700 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 CDK5RAP1Q96SZ6 601 aaKnown RBP17.08■□□□□ 0.32
CLN8-206ENST00000523237 SPHK2Q9NRA0 654 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 CLIC5Q9NZA1 410 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 HESX1Q9UBX0 185 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 DNMT3LQ9UJW3 386 aa17.08■□□□□ 0.32
CLN8-206ENST00000523237 LSM7Q9UK45 103 aaKnown RBP17.08■□□□□ 0.32
CLN8-206ENST00000523237 GPR179Q6PRD1 2367 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 SPAG17Q6Q759 2223 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 P4HA2O15460 535 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 HOXC11O43248 304 aaPredicted RBP17.07■□□□□ 0.32
CLN8-206ENST00000523237 RPP40O75818 363 aaKnown RBP17.07■□□□□ 0.32
CLN8-206ENST00000523237 KAT7O95251 611 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 GNA14O95837 355 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 RETP07949 1114 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 RALAP11233 206 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 CD19P15391 556 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 PLA2G4AP47712 749 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 BCAT1P54687 386 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 STX17P56962 302 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 MRPS21P82921 87 aaKnown RBP17.07■□□□□ 0.32
CLN8-206ENST00000523237 GOLGA7BQ2TAP0 167 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 PREPLQ4J6C6 727 aaPredicted RBP17.07■□□□□ 0.32
CLN8-206ENST00000523237 SCD5Q86SK9 330 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 PIGZQ86VD9 579 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 C12orf40Q86WS4 652 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 ARHGAP18Q8N392 663 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 ZNF276Q8N554 614 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 GAB3Q8WWW8 586 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 WBP2Q969T9 261 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 ARHGEF4Q9NR80 690 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 POLR3BQ9NW08 1133 aaPredicted RBP17.07■□□□□ 0.32
CLN8-206ENST00000523237 NUDT5Q9UKK9 219 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 TSPAN16Q9UKR8 245 aa17.07■□□□□ 0.32
CLN8-206ENST00000523237 DMXL1Q9Y485 3027 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 A0A0A0MRY4 1105 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 AXIN1O15169 862 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 GREM1O60565 184 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 LRP3O75074 770 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 FGFR1OPO95684 399 aaKnown RBP17.06■□□□□ 0.32
CLN8-206ENST00000523237 APBB3O95704 486 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 CCDC192P0DO97 292 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 VDRP11473 427 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 GRIA2P42262 883 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 KDSRQ06136 332 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 BST2Q10589 180 aaKnown RBP17.06■□□□□ 0.32
CLN8-206ENST00000523237 ANO4Q32M45 955 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 RAB41Q5JT25 222 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 TTC30AQ86WT1 665 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 TMEM25Q86YD3 366 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 ETFBKMTQ8IXQ9 262 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 PPM1KQ8N3J5 372 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 UBR7Q8N806 425 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 KIAA1468Q9P260 1216 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 KIAA1257Q9ULG3 409 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 MMP17Q9ULZ9 603 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 USP18Q9UMW8 372 aa17.06■□□□□ 0.32
CLN8-206ENST00000523237 XPO1O14980 1071 aaKnown RBP17.05■□□□□ 0.32
CLN8-206ENST00000523237 MDM4O15151 490 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 PAEPP09466 180 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 TNFRSF4P43489 277 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 TKTL1P51854 596 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 MARSP56192 900 aaKnown RBP17.05■□□□□ 0.32
CLN8-206ENST00000523237 PDE4CQ08493 712 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 KCNH2Q12809 1159 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 CAMK4Q16566 473 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 HSF5Q4G112 596 aaPredicted RBP17.05■□□□□ 0.32
CLN8-206ENST00000523237 TMEM270Q6UE05 265 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 NUDT18Q6ZVK8 323 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 CACNA2D4Q7Z3S7 1137 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 MIB1Q86YT6 1006 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 TRIM59Q8IWR1 403 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 FAM160A2Q8N612 972 aaPredicted RBP17.05■□□□□ 0.32
CLN8-206ENST00000523237 NAT16Q8N8M0 369 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 TSTD1Q8NFU3 115 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 RMDN1Q96DB5 314 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 SRRTQ9BXP5 876 aaKnown RBP17.05■□□□□ 0.32
CLN8-206ENST00000523237 DEC1Q9P2X7 70 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 EBF1Q9UH73 591 aa17.05■□□□□ 0.32
CLN8-206ENST00000523237 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.05■□□□□ 0.32
CLN8-206ENST00000523237 TBC1D3BA6NDS4 549 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 TULP3O75386 442 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 STC2O76061 302 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 ZBED1O96006 694 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 TGM1P22735 817 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 TIE1P35590 1138 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 YWHAGP61981 247 aaKnown RBP eCLIP17.04■□□□□ 0.32
CLN8-206ENST00000523237 COG7P83436 770 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 LMNB2Q03252 620 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 SPEM2Q0P670 501 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 MESP2Q0VG99 397 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 PM20D1Q6GTS8 502 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 RSRC2Q7L4I2 434 aaKnown RBP17.04■□□□□ 0.32
CLN8-206ENST00000523237 SFTPA1Q8IWL2 248 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 PHTF2Q8N3S3 785 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 CCDC33Q8N5R6 958 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 LMO3Q8TAP4 145 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 BBS2Q9BXC9 721 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 LRRC4Q9HBW1 653 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms