RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 DRC1Q96MC2 740 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 RNF26Q9BY78 433 aaPredicted RBP8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 ADNPQ9H2P0 1102 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 TMEM134Q9H6X4 195 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 ANAPC2Q9UJX6 822 aa8.13□□□□□ -1.11
HMBOX1-208ENST00000521516 TP53BP1Q12888 1972 aaPredicted RBP8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 MED13Q9UHV7 2174 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 NUMA1Q14980 2115 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 PIRO00625 290 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 OPA1O60313 960 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 CXCL8P10145 99 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 CYP2F1P24903 491 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 ACSL1P33121 698 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 MLLT3P42568 568 aaPredicted RBP8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 RXRGP48443 463 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 COPAP53621 1224 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 OXCT1P55809 520 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 RACK1P63244 317 aaKnown RBP8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 NTRK3Q16288 839 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 SPATA1Q5VX52 437 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 PTRH1Q86Y79 214 aaKnown RBP8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 TMEM25Q86YD3 366 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 IFT74Q96LB3 600 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 TSPAN18Q96SJ8 248 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 TCHPQ9BT92 498 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 CCSER1Q9C0I3 900 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 KDM4CQ9H3R0 1056 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 SPHK2Q9NRA0 654 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 SMPD4Q9NXE4 827 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 PLAAQ9Y263 795 aa8.12□□□□□ -1.11
HMBOX1-208ENST00000521516 ZNF840PA6NDX5 716 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 NPC1O15118 1278 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 XPOTO43592 962 aaKnown RBP8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 CACNG3O60359 315 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 OAS1P00973 400 aaKnown RBP8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 AKAP17AQ02040 695 aaKnown RBP8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 CLCA4Q14CN2 919 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 SEZ6Q53EL9 994 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 C9orf57Q5W0N0 161 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 WSCD1Q658N2 575 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 NEK8Q86SG6 692 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 CHD1LQ86WJ1 897 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 PKMYT1Q99640 499 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 DNAJC17Q9NVM6 304 aaKnown RBP8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 TRPM5Q9NZQ8 1165 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 SATB2Q9UPW6 733 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 NAV3Q8IVL0 2385 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 WNT1P04628 370 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 ADRB2P07550 413 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 SPATA31C1P0DKV0 1188 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 ARRB1P49407 418 aaPredicted RBP8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 BNIP3Q12983 259 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 MORC3Q14149 939 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 NOLC1Q14978 699 aaKnown RBP eCLIP8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 SMC5Q8IY18 1101 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 SRRM1Q8IYB3 904 aaKnown RBP8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 NSUN7Q8NE18 718 aaKnown RBP8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 SSC4DQ8WTU2 575 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 GRAMD1AQ96CP6 724 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 ZBTB45Q96K62 511 aaPredicted RBP8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 FUCA2Q9BTY2 467 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 ERVMER34-1Q9H9K5 563 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 ARHGAP28Q9P2N2 729 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 LRWD1Q9UFC0 647 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 APCP25054 2843 aa8.11□□□□□ -1.11
HMBOX1-208ENST00000521516 VPS37CA5D8V6 355 aaPredicted RBP8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 CYB561D2O14569 222 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 BAG4O95429 457 aaKnown RBP8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 SEMA4FO95754 770 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 CLTAP09496 248 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 CISD3P0C7P0 127 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 ACADMP11310 421 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 HARSP12081 509 aaKnown RBP8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 PPP3CCP48454 512 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 BCAT1P54687 386 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 TSPY1Q01534 308 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 ZNF211Q13398 564 aaPredicted RBP8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 PDIA5Q14554 519 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 ISXQ2M1V0 245 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 ANO4Q32M45 955 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 CFAP221Q4G0U5 840 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 CREB3L3Q68CJ9 461 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 GALNT17Q6IS24 598 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 FAM124AQ86V42 546 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 FAM177A1Q8N128 213 aaPredicted RBP8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 KIFAP3Q92845 792 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 HPS3Q969F9 1004 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 SKA1Q96BD8 255 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 CEP295NLQ96MC4 621 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 TCEANC2Q96MN5 208 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 NAP1L4Q99733 375 aaKnown RBP8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 TTLL2Q9BWV7 592 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 THAP10Q9P2Z0 257 aaPredicted RBP8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 SPG11Q96JI7 2443 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 LACTBL1A8MY62 500 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 NOBOXO60393 691 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 CCNT1O60563 726 aaKnown RBP8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 TOM1L1O75674 476 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 AGFG2O95081 481 aa8.1□□□□□ -1.11
HMBOX1-208ENST00000521516 IGHV4-34P06331 123 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms