RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 HMX2A2RU54 273 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 PABPN1LA6NDY0 278 aaKnown RBP8.98□□□□□ -0.97
SHPRH-208ENST00000520752 SLC22A31A6NKX4 558 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 MEIS3P2A8K0S8 358 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 KRIT1O00522 736 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 PSMA7O14818 248 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 RNF113AO15541 343 aaKnown RBP8.98□□□□□ -0.97
SHPRH-208ENST00000520752 EXOC3O60645 756 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 SULT1C4O75897 302 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 TSPAN9O75954 239 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 LRIG2O94898 1065 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 OR6B1O95007 311 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 CST3P01034 146 aaPredicted RBP8.98□□□□□ -0.97
SHPRH-208ENST00000520752 S100BP04271 92 aaPredicted RBP8.98□□□□□ -0.97
SHPRH-208ENST00000520752 NAGAP17050 411 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 PRDX6P30041 224 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 HOXD13P35453 343 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 NPEPPSP55786 919 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 GJA9P57773 515 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 TFAP4Q01664 338 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 KLRC3Q07444 240 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 TRAP1Q12931 704 aaKnown RBP8.98□□□□□ -0.97
SHPRH-208ENST00000520752 STK4Q13043 487 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 TRADDQ15628 312 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 TBCCQ15814 346 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 KCNJ8Q15842 424 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 MOGQ16653 247 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 EDRF1Q3B7T1 1238 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 NKAPLQ5M9Q1 402 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 C6orf10Q5SRN2 563 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 GPAT2Q6NUI2 795 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 FOXR2Q6PJQ5 311 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 VSTM1Q6UX27 236 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 PTF1AQ7RTS3 328 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 HAUS6Q7Z4H7 955 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 ARPINQ7Z6K5 226 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 TMPRSS6Q8IU80 811 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 IRF2BP1Q8IU81 584 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 SLFN12Q8IYM2 578 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 CARNMT1Q8N4J0 409 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 DCLK2Q8N568 766 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 BBOF1Q8ND07 529 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 PDZD8Q8NEN9 1154 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 TTLL11Q8NHH1 800 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 HCAR2Q8TDS4 363 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 C10orf82Q8WW14 230 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 TRUB1Q8WWH5 349 aaKnown RBP8.98□□□□□ -0.97
SHPRH-208ENST00000520752 MTMR8Q96EF0 704 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 PTCD3Q96EY7 689 aaKnown RBP8.98□□□□□ -0.97
SHPRH-208ENST00000520752 PLEKHA8Q96JA3 519 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 CEP295NLQ96MC4 621 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 TTC25Q96NG3 672 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 FOXQ1Q9C009 403 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 CCDC177Q9NQR7 707 aaPredicted RBP8.98□□□□□ -0.97
SHPRH-208ENST00000520752 AGPAT5Q9NUQ2 364 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 GMIPQ9P107 970 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 ARHGAP20Q9P2F6 1191 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 PRKAG2Q9UGJ0 569 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 LZTS1Q9Y250 596 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 ADGRA3Q8IWK6 1321 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 CPDO75976 1380 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 PALLDQ8WX93 1383 aa8.98□□□□□ -0.97
SHPRH-208ENST00000520752 FAM172BPA6NC97 362 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 RSPH10B2B2RC85 870 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 B8ZZF3 427 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 B4GALT4O60513 344 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 EDF1O60869 148 aaKnown RBP8.97□□□□□ -0.97
SHPRH-208ENST00000520752 DNAJA2O60884 412 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 HAUS5O94927 633 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 TTLL1O95922 423 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 FUCA1P04066 466 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 SERPING1P05155 500 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 RSPH10BP0C881 870 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 PCP11498 1178 aaKnown RBP8.97□□□□□ -0.97
SHPRH-208ENST00000520752 MYL6BP14649 208 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 ZNF23P17027 643 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 IFNA8P32881 189 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 TTKP33981 857 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 NUDT1P36639 197 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 ALDH3B2P48448 385 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 TUFMP49411 452 aaKnown RBP8.97□□□□□ -0.97
SHPRH-208ENST00000520752 PTENP60484 403 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 THOC5Q13769 683 aaKnown RBP8.97□□□□□ -0.97
SHPRH-208ENST00000520752 SPARCL1Q14515 664 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 MAPRE2Q15555 327 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 RSPO4Q2I0M5 234 aaPredicted RBP8.97□□□□□ -0.97
SHPRH-208ENST00000520752 SHROOM1Q2M3G4 852 aaPredicted RBP8.97□□□□□ -0.97
SHPRH-208ENST00000520752 ANO4Q32M45 955 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 SLC9C1Q4G0N8 1177 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 CDONQ4KMG0 1287 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 RFWD3Q6PCD5 774 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 CENPUQ71F23 418 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 CLNKQ7Z7G1 428 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 DHDDSQ86SQ9 333 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 DCP2Q8IU60 420 aaKnown RBP8.97□□□□□ -0.97
SHPRH-208ENST00000520752 ZNF34Q8IZ26 560 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.97□□□□□ -0.97
SHPRH-208ENST00000520752 MFSD2AQ8NA29 543 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 ICA1LQ8NDH6 482 aa8.97□□□□□ -0.97
SHPRH-208ENST00000520752 TMEM40Q8WWA1 233 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms