RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 ARL4AP40617 200 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 MATKP42679 507 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 NKX3-2P78367 333 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 PRKCZQ05513 592 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 MGAT3Q09327 533 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 FASTKD3Q14CZ7 662 aaKnown RBP8.77□□□□□ -1.01
HMGB4-203ENST00000519684 DPYSL2Q16555 572 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 CA9Q16790 459 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 ANKRD22Q5VYY1 191 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 C4orf22Q6V702 233 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 CAPN12Q6ZSI9 719 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 TADA2BQ86TJ2 420 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 RPAINQ86UA6 219 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 TAX1BP1Q86VP1 789 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 ANKMY2Q8IV38 441 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 FUKQ8N0W3 1084 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 PQLC3Q8N755 202 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 PCDH19Q8TAB3 1148 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 KCTD13Q8WZ19 329 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 LPPQ93052 612 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 FAF2Q96CS3 445 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 PRMT1Q99873 361 aaKnown RBP8.77□□□□□ -1.01
HMGB4-203ENST00000519684 SYT15Q9BQS2 421 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 NRDE2Q9H7Z3 1164 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 KRT82Q9NSB4 513 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 NKIRAS1Q9NYS0 192 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 GGA2Q9UJY4 613 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 STAP1Q9ULZ2 295 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 NOD1Q9Y239 953 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 ACTL7BQ9Y614 415 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 FAM169AQ9Y6X4 670 aa8.77□□□□□ -1.01
HMGB4-203ENST00000519684 ATXN2Q99700 1313 aaKnown RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 TMEM120BA0PK00 339 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 BCLAF3A2AJT9 711 aaKnown RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 CLDN5O00501 218 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 GABRDO14764 452 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 FBXO21O94952 628 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 ASGR1P07306 291 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 TFE3P19532 575 aaPredicted RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 IL4RP24394 825 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 L1CAMP32004 1257 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 SCNN1GP51170 649 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 CLCNKBP51801 687 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 MRPS5P82675 430 aaKnown RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 CACNB2Q08289 660 aaPredicted RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 KCNA10Q16322 511 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 SLC25A52Q3SY17 297 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 BBS9Q3SYG4 887 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 GKAP1Q5VSY0 366 aaPredicted RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 TDRPQ86YL5 185 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 PALM2Q8IXS6 379 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 SRRM1Q8IYB3 904 aaKnown RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 CACNA2D3Q8IZS8 1091 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 DEFB106AQ8N104 65 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 ANKRD42Q8N9B4 389 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 RNF169Q8NCN4 708 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 MGARPQ8TDB4 240 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 WNT8BQ93098 351 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 PGBD4Q96DM1 585 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 C11orf84Q9BUA3 381 aaPredicted RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 FRMD8Q9BZ67 464 aaPredicted RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 KLC2Q9H0B6 622 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 CCDC134Q9H6E4 229 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 SLC24A2Q9UI40 661 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 CASP8AP2Q9UKL3 1982 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 MEIS3P2A8K0S8 358 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 RASA4BC9J798 803 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 CHADO15335 359 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 RASA4O43374 803 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 ADAMTS4O75173 837 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 VIMP08670 466 aaKnown RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 ODC1P11926 461 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 TSHRP16473 764 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 IBSPP21815 317 aaPredicted RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 DRD4P21917 467 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 PCSK1P29120 753 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 CD52P31358 61 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 NOS2P35228 1153 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 IFNAR2P48551 515 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 NR2C2P49116 596 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 MAP3K7CLP57077 242 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 YWHAZP63104 245 aaKnown RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 TRIM32Q13049 653 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 XRCC4Q13426 336 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 CCDC142Q17RM4 750 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 KLHL38Q2WGJ6 581 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 DCAF6Q58WW2 860 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 FNBP1LQ5T0N5 605 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 MRPL10Q7Z7H8 261 aaKnown RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 METTL23Q86XA0 190 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 PSTKQ8IV42 348 aaKnown RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 PCSK9Q8NBP7 692 aaKnown RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 FBXO36Q8NEA4 188 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 KCTD15Q96SI1 283 aaPredicted RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 PRDM16Q9HAZ2 1276 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 UBN1Q9NPG3 1134 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 RAB6BQ9NRW1 208 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 SENP1Q9P0U3 644 aa8.76□□□□□ -1.01
HMGB4-203ENST00000519684 PSMC3IPQ9P2W1 217 aaPredicted RBP8.76□□□□□ -1.01
HMGB4-203ENST00000519684 CDH9Q9ULB4 789 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms