RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 CNR2P34972 360 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 RAB27AP51159 221 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 NCKAP1LP55160 1127 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 ACTR2P61160 394 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 CREMQ03060 361 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 SPIRE1Q08AE8 756 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 TRDNQ13061 729 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 GRM4Q14833 912 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 SART3Q15020 963 aaKnown RBP6.84□□□□□ -1.31
CCDC6-203ENST00000518638 FNDC3BQ53EP0 1204 aaKnown RBP6.84□□□□□ -1.31
CCDC6-203ENST00000518638 BRAPQ7Z569 592 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 MILR1Q7Z6M3 343 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 MIB1Q86YT6 1006 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 SYNPOQ8N3V7 929 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 SLC16A11Q8NCK7 471 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 PIP4K2CQ8TBX8 421 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 PHOSPHO1Q8TCT1 267 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 URGCPQ8TCY9 931 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 CPA5Q8WXQ8 436 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 AUTS2Q8WXX7 1259 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 CLDN23Q96B33 292 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 ZBTB10Q96DT7 871 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 RRP36Q96EU6 259 aaKnown RBP6.84□□□□□ -1.31
CCDC6-203ENST00000518638 FAM167AQ96KS9 214 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 SCLT1Q96NL6 688 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 PCYT2Q99447 389 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 SMOC1Q9H4F8 434 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 LTB4R2Q9NPC1 389 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 SEMA4GQ9NTN9 838 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 TCEAL9Q9UHQ7 104 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 PCDHB4Q9Y5E5 795 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 PCDHA9Q9Y5H5 950 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.84□□□□□ -1.31
CCDC6-203ENST00000518638 NUMBLQ9Y6R0 609 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 USP24Q9UPU5 2620 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 CHD8Q9HCK8 2581 aa6.84□□□□□ -1.31
CCDC6-203ENST00000518638 CFAP47Q6ZTR5 3102 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 RALGAPA1Q6GYQ0 2036 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 MYH9P35579 1960 aaKnown RBP6.83□□□□□ -1.32
CCDC6-203ENST00000518638 IGKV6D-21A0A0A0MT36 114 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 TCRBV5S2A0A599 114 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 MEIS2O14770 477 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 PPP1R12AO14974 1030 aaPredicted RBP6.83□□□□□ -1.32
CCDC6-203ENST00000518638 MATN3O15232 486 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 GPR32O75388 356 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 GALTP07902 379 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 CNPP09543 421 aaKnown RBP6.83□□□□□ -1.32
CCDC6-203ENST00000518638 ARP10275 920 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 SMARCA1P28370 1054 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 CCR3P51677 355 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 SLURP1P55000 103 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 SLC44A4Q53GD3 710 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 NOMO2Q5JPE7 1267 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 MIS18BP1Q6P0N0 1132 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 USP17L6PQ6QN14 398 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 UNQ6494/PRO21346Q6UXR6 183 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 ZNF852Q6ZMS4 543 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 GET4Q7L5D6 327 aaPredicted RBP6.83□□□□□ -1.32
CCDC6-203ENST00000518638 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.83□□□□□ -1.32
CCDC6-203ENST00000518638 ZNF589Q86UQ0 364 aaPredicted RBP6.83□□□□□ -1.32
CCDC6-203ENST00000518638 GPR65Q8IYL9 337 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 METTL13Q8N6R0 699 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 PCDH19Q8TAB3 1148 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 PGBD4Q96DM1 585 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 FAM227BQ96M60 508 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 MYADMQ96S97 322 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 MAP3K14Q99558 947 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 KCNJ15Q99712 375 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 TMEM175Q9BSA9 504 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 SPZ1Q9BXG8 430 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 INO80BQ9C086 356 aaPredicted RBP6.83□□□□□ -1.32
CCDC6-203ENST00000518638 TRIM39Q9HCM9 518 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 ZNF302Q9NR11 478 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.83□□□□□ -1.32
CCDC6-203ENST00000518638 KCNH7Q9NS40 1196 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 MYOTQ9UBF9 498 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 FAN1Q9Y2M0 1017 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 GPR179Q6PRD1 2367 aa6.83□□□□□ -1.32
CCDC6-203ENST00000518638 MTCL1Q9Y4B5 1905 aaKnown RBP6.82□□□□□ -1.32
CCDC6-203ENST00000518638 HIP1O00291 1037 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 MAN2B1O00754 1011 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 CYTH3O43739 400 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 RASGRP1O95267 797 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 C22orf31O95567 290 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 VTNP04004 478 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 ALDH2P05091 517 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 ATF2P15336 505 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 SFPQP23246 707 aaKnown RBP eCLIP6.82□□□□□ -1.32
CCDC6-203ENST00000518638 GNAQP50148 359 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 AK2P54819 239 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 NLRP11P59045 1033 aaKnown RBP6.82□□□□□ -1.32
CCDC6-203ENST00000518638 ADCY1Q08828 1119 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 SEC23AQ15436 765 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 AASDHQ4L235 1098 aaPredicted RBP6.82□□□□□ -1.32
CCDC6-203ENST00000518638 TWF2Q6IBS0 349 aaKnown RBP6.82□□□□□ -1.32
CCDC6-203ENST00000518638 ETV3LQ6ZN32 361 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 CATIPQ7Z7H3 387 aa6.82□□□□□ -1.32
CCDC6-203ENST00000518638 CTCFLQ8NI51 663 aaPredicted RBP6.82□□□□□ -1.32
CCDC6-203ENST00000518638 UHMK1Q8TAS1 419 aaKnown RBP6.82□□□□□ -1.32
CCDC6-203ENST00000518638 MAGEB10Q96LZ2 347 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms