RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 ROR1Q01973 937 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 STX3Q13277 289 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 TUBB3Q13509 450 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 TTLL12Q14166 644 aaPredicted RBP12.84□□□□□ -0.35
PCM1-203ENST00000517545 TRIP10Q15642 601 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 MMEL1Q495T6 779 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 TCHHL1Q5QJ38 904 aaPredicted RBP12.84□□□□□ -0.35
PCM1-203ENST00000517545 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 CCDC60Q8IWA6 550 aaPredicted RBP12.84□□□□□ -0.35
PCM1-203ENST00000517545 TRIM42Q8IWZ5 723 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 MCPH1Q8NEM0 835 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 DNAJC1Q96KC8 554 aaKnown RBP12.84□□□□□ -0.35
PCM1-203ENST00000517545 IMPG2Q9BZV3 1241 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 KLHL4Q9C0H6 718 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 TMX4Q9H1E5 349 aaPredicted RBP12.84□□□□□ -0.35
PCM1-203ENST00000517545 POPDC2Q9HBU9 364 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 XAB2Q9HCS7 855 aaKnown RBP12.84□□□□□ -0.35
PCM1-203ENST00000517545 CYP26B1Q9NR63 512 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 ATXN10Q9UBB4 475 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 PHF24Q9UPV7 400 aa12.84□□□□□ -0.35
PCM1-203ENST00000517545 LRRIQ4A6NIV6 560 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 MIPP30301 263 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 TNFSF9P41273 254 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 PRKCEQ02156 737 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 GRM2Q14416 872 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 PDK3Q15120 406 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 HADHQ16836 314 aaKnown RBP12.83□□□□□ -0.36
PCM1-203ENST00000517545 C16orf46Q6P387 395 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 AAGABQ6PD74 315 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 C1orf228Q6PIY5 440 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 ADGRG6Q86SQ4 1221 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 RSPH3Q86UC2 560 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 MCF2L2Q86YR7 1114 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 THNSL1Q8IYQ7 743 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 MTMR12Q9C0I1 747 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 STYXL1Q9Y6J8 313 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 LY75O60449 1722 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 TTLL13PA6NNM8 815 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 TAP1Q03518 808 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 ORC1Q13415 861 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 ATG14Q6ZNE5 492 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 ADGRF2Q8IZF7 708 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.83□□□□□ -0.36
PCM1-203ENST00000517545 PXMP2Q9NR77 195 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 DNAJC16Q9Y2G8 782 aa12.83□□□□□ -0.36
PCM1-203ENST00000517545 H7C0C1 242 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 ZMPSTE24O75844 475 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 ASS1P00966 412 aaKnown RBP12.82□□□□□ -0.36
PCM1-203ENST00000517545 SERPINB6P35237 376 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 ATP5OP48047 213 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 PSMC1P62191 440 aaKnown RBP12.82□□□□□ -0.36
PCM1-203ENST00000517545 RABGAP1LQ5R372 815 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 SH3PXD2AQ5TCZ1 1133 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 CAND1Q86VP6 1230 aaKnown RBP12.82□□□□□ -0.36
PCM1-203ENST00000517545 HPS6Q86YV9 775 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 NME8Q8N427 588 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 ITFG2Q969R8 447 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 HIC2Q96JB3 615 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 MPP4Q96JB8 637 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 FRMD8P1Q9BZ68 369 aaPredicted RBP12.82□□□□□ -0.36
PCM1-203ENST00000517545 PNPLA8Q9NP80 782 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 PCDHGB4Q9UN71 923 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 PCDHGB5Q9Y5G0 923 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 RAG1P15918 1043 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 RPL10AP62906 217 aaKnown RBP12.82□□□□□ -0.36
PCM1-203ENST00000517545 WASHC5Q12768 1159 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.82□□□□□ -0.36
PCM1-203ENST00000517545 ARHGEF16Q5VV41 709 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 STKLD1Q8NE28 680 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 GCNAQ96QF7 691 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 PEBP4Q96S96 227 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 CPXM1Q96SM3 734 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 ZNF341Q9BYN7 854 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 LOC100653049A0A140TA62 436 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 CCNT2O60583 730 aaKnown RBP12.82□□□□□ -0.36
PCM1-203ENST00000517545 SPAG6O75602 509 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 KRT34O76011 436 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 GSRP00390 522 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 APRTP07741 180 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 CD19P15391 556 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 EIF4BP23588 611 aaKnown RBP12.82□□□□□ -0.36
PCM1-203ENST00000517545 ALDH1B1P30837 517 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 USP46P62068 366 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 TBCCQ15814 346 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 UGT2A3Q6UWM9 527 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 MAVSQ7Z434 540 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 TTLL6Q8N841 843 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 PPP1R14CQ8TAE6 165 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 TMEM39BQ9GZU3 492 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 SLC17A6Q9P2U8 582 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 CDH22Q9UJ99 828 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 ZNF180Q9UJW8 692 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 PACSIN3Q9UKS6 424 aa12.82□□□□□ -0.36
PCM1-203ENST00000517545 ANKRD31Q8N7Z5 1873 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 CAPN8A6NHC0 703 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 K7ERI5 159 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 SIN3BO75182 1162 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 SMIM18P0DKX4 95 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 PRKCHP24723 683 aa12.81□□□□□ -0.36
PCM1-203ENST00000517545 COPAP53621 1224 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms