RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 EPM2AIP1Q7L775 607 aaPredicted RBP16.68■□□□□ 0.26
LMNA-223ENST00000515459 PROSER1Q86XN7 944 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 RGL4Q8IZJ4 473 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 XXYLT1Q8NBI6 393 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 ZNF516Q92618 1163 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 WBP2Q969T9 261 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 ZNF419Q96HQ0 510 aaPredicted RBP16.68■□□□□ 0.26
LMNA-223ENST00000515459 TNIP3Q96KP6 325 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 XPO6Q96QU8 1125 aaKnown RBP16.68■□□□□ 0.26
LMNA-223ENST00000515459 ACOX2Q99424 681 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 FAM124BQ9H5Z6 455 aaPredicted RBP16.68■□□□□ 0.26
LMNA-223ENST00000515459 UPF2Q9HAU5 1272 aaKnown RBP16.68■□□□□ 0.26
LMNA-223ENST00000515459 CD248Q9HCU0 757 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 GMIPQ9P107 970 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 SUSD2Q9UGT4 822 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 PCDHB9Q9Y5E1 797 aa16.68■□□□□ 0.26
LMNA-223ENST00000515459 ADAMTS20P59510 1910 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 NEDD8-MDP1E9PL57 170 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 CLIC2O15247 247 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 CACNG3O60359 315 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 PHACTR2O75167 634 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 NDUFS2O75306 463 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 SNRPFP62306 86 aaKnown RBP16.67■□□□□ 0.26
LMNA-223ENST00000515459 PLEKHG6Q3KR16 790 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 SYCP2LQ5T4T6 812 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 PAQR9Q6ZVX9 377 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 SCFD1Q8WVM8 642 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 FOXJ1Q92949 421 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 GABRG3Q99928 467 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 BBS2Q9BXC9 721 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 TRIM9Q9C026 710 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 SMYD3Q9H7B4 428 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 VRTNQ9H8Y1 702 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 KBTBD4Q9NVX7 518 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 WDR35Q9P2L0 1181 aa16.67■□□□□ 0.26
LMNA-223ENST00000515459 SH3BP5O60239 455 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 TLR5O60602 858 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 GJB3O75712 270 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 AP1G2O75843 785 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 CLSTN1O94985 981 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 CAPNS1P04632 268 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 TYRP14679 529 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 GNSP15586 552 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 CDH8P55286 799 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 ASIC1P78348 528 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 AMPD3Q01432 767 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 FAM26FQ5R3K3 315 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 ADAMTS14Q8WXS8 1223 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 ERLEC1Q96DZ1 483 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 MRGPRX1Q96LB2 322 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 CAMK1GQ96NX5 476 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 USP28Q96RU2 1077 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 GZF1Q9H116 711 aaPredicted RBP16.66■□□□□ 0.26
LMNA-223ENST00000515459 CUEDC2Q9H467 287 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 FBXO44Q9H4M3 255 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 TLR8Q9NR97 1041 aaKnown RBP16.66■□□□□ 0.26
LMNA-223ENST00000515459 KRT82Q9NSB4 513 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 UBE4BO95155 1302 aa16.66■□□□□ 0.26
LMNA-223ENST00000515459 DMXL2Q8TDJ6 3036 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 PRRT4C9JH25 899 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 GFRA2O00451 464 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 GREM1O60565 184 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 GOLGA8FQ08AF8 430 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 GOLGA8DPQ0D2H9 430 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 BIRC3Q13489 604 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 CUL4AQ13619 759 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 E2F4Q16254 413 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 ZNF699Q32M78 642 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 ZNF667Q5HYK9 610 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 WDR45BQ5MNZ6 344 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 TPGS1Q6ZTW0 290 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 TOGARAM2Q6ZUX3 1019 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 NAXDQ8IW45 347 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 NELFCDQ8IXH7 590 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 FUKQ8N0W3 1084 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 KLF16Q9BXK1 252 aaPredicted RBP16.65■□□□□ 0.26
LMNA-223ENST00000515459 SLC6A17Q9H1V8 727 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 CD93Q9NPY3 652 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.65■□□□□ 0.262e-7■■■■■ 84.2
LMNA-223ENST00000515459 MARK1Q9P0L2 795 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 LSM7Q9UK45 103 aaKnown RBP16.65■□□□□ 0.26
LMNA-223ENST00000515459 RAD54BQ9Y620 910 aa16.65■□□□□ 0.26
LMNA-223ENST00000515459 TBX18O95935 607 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 FTH1P19P0C7X4 201 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 SYT1P21579 422 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 ATP5C1P36542 298 aaKnown RBP16.64■□□□□ 0.25
LMNA-223ENST00000515459 DGKGP49619 791 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 PGFP49763 221 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 SCAPQ12770 1279 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 CNNM4Q6P4Q7 775 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 ACOT1Q86TX2 421 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 ZMIZ2Q8NF64 920 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 SMOQ99835 787 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 ZDHHC5Q9C0B5 715 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 CYLDQ9NQC7 956 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 CACNA2D2Q9NY47 1150 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 CGNQ9P2M7 1197 aaKnown RBP16.64■□□□□ 0.25
LMNA-223ENST00000515459 GPSM3Q9Y4H4 160 aa16.64■□□□□ 0.25
LMNA-223ENST00000515459 DSPP15924 2871 aaKnown RBP16.63■□□□□ 0.25
LMNA-223ENST00000515459 BEST1O76090 585 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms