RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 PI4K2BG5E9Z4 385 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 SYN3O14994 580 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 HOXA2O43364 376 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 HCRTO43612 131 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 TRAPPC3O43617 180 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 CST8O60676 142 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 ATP2C2O75185 946 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 DAB1O75553 588 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 ZNF189O75820 626 aaPredicted RBP10.65□□□□□ -0.7
SNF8-214ENST00000515174 POMCP01189 267 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 CXCL10P02778 98 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 NUDT17P0C025 328 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 KRT10P13645 584 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 ZFXP17010 805 aaPredicted RBP10.65□□□□□ -0.7
SNF8-214ENST00000515174 TGM2P21980 687 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 IL4RP24394 825 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 IGFBP6P24592 240 aaPredicted RBP10.65□□□□□ -0.7
SNF8-214ENST00000515174 ZNF135P52742 658 aaPredicted RBP10.65□□□□□ -0.7
SNF8-214ENST00000515174 PLTPP55058 493 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 FPGSQ05932 587 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 DHX9Q08211 1270 aaKnown RBP10.65□□□□□ -0.7
SNF8-214ENST00000515174 FAAP100Q0VG06 881 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 UAP1Q16222 522 aaPredicted RBP10.65□□□□□ -0.7
SNF8-214ENST00000515174 TUBB8Q3ZCM7 444 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 MDH1BQ5I0G3 518 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 INTS6LQ5JSJ4 861 aaKnown RBP10.65□□□□□ -0.7
SNF8-214ENST00000515174 ZFYVE27Q5T4F4 411 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 ERMARDQ5T6L9 678 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 ZNF365Q70YC5 407 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 TRMT10CQ7L0Y3 403 aaKnown RBP10.65□□□□□ -0.7
SNF8-214ENST00000515174 FAM35AQ86V20 835 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 FBXO25Q8TCJ0 367 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 FAM172AQ8WUF8 416 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 SEPT8Q92599 483 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 FAM122AQ96E09 287 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 PCED1BQ96HM7 432 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 SCLYQ96I15 445 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 GDAP1L1Q96MZ0 367 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 ZIM3Q96PE6 472 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 PEBP4Q96S96 227 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 NPY6RQ99463 290 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 GAS2L1Q99501 681 aaPredicted RBP10.65□□□□□ -0.7
SNF8-214ENST00000515174 SMOQ99835 787 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 LPIN3Q9BQK8 851 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 TRIM62Q9BVG3 475 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 OXCT2Q9BYC2 517 aaPredicted RBP10.65□□□□□ -0.7
SNF8-214ENST00000515174 PABPC3Q9H361 631 aaKnown RBP10.65□□□□□ -0.7
SNF8-214ENST00000515174 HIPK3Q9H422 1215 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 ZWILCHQ9H900 591 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 PCDH9Q9HC56 1237 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 TBX21Q9UL17 535 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 DNPEPQ9ULA0 475 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 NLRC5Q86WI3 1866 aa10.65□□□□□ -0.7
SNF8-214ENST00000515174 TTC3P53804 2025 aa10.65□□□□□ -0.71
SNF8-214ENST00000515174 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.64□□□□□ -0.71
SNF8-214ENST00000515174 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.64□□□□□ -0.71
SNF8-214ENST00000515174 NBNO60934 754 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 F9P00740 461 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 KRT14P02533 472 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 CLTBP09497 229 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 LCP1P13796 627 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 ATF2P15336 505 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 IBSPP21815 317 aaPredicted RBP10.64□□□□□ -0.71
SNF8-214ENST00000515174 DNAJB2P25686 324 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 GJC1P36383 396 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 NR2C2P49116 596 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 CDH6P55285 790 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 DAOAP59103 153 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 XRCC4Q13426 336 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 SNX1Q13596 522 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 DPYSL3Q14195 570 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 TAF5Q15542 800 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 TCTN1Q2MV58 587 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 C15orf59Q2T9L4 293 aaPredicted RBP10.64□□□□□ -0.71
SNF8-214ENST00000515174 CLLU1OSQ5K130 101 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 SH3PXD2AQ5TCZ1 1133 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 SLC9A4Q6AI14 798 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 OVOS1Q6IE37 1185 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 C4orf22Q6V702 233 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 PCGF5Q86SE9 256 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 ZMIZ2Q8NF64 920 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 ACTL9Q8TC94 416 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 EXOC4Q96A65 974 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 NTAN1Q96AB6 310 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 TIFAQ96CG3 184 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 FUBP3Q96I24 572 aaKnown RBP eCLIP10.64□□□□□ -0.71
SNF8-214ENST00000515174 CFAP57Q96MR6 1250 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 RUFY1Q96T51 708 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 PAAF1Q9BRP4 392 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 MED10Q9BTT4 135 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 MAK16Q9BXY0 300 aaKnown RBP10.64□□□□□ -0.71
SNF8-214ENST00000515174 PLEKHA4Q9H4M7 779 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 POPDC2Q9HBU9 364 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 PCDH18Q9HCL0 1135 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 TMEM39AQ9NV64 488 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 PCSK1NQ9UHG2 260 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 STAP1Q9ULZ2 295 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 ZNF148Q9UQR1 794 aa10.64□□□□□ -0.71
SNF8-214ENST00000515174 USP3Q9Y6I4 520 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms