RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 SMRP1Q8NCR6 262 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 PIGOQ8TEQ8 1089 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 MRPS27Q92552 414 aaKnown RBP7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 CPB2Q96IY4 423 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 ZNF558Q96NG5 402 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 MTMR9Q96QG7 549 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 TCF25Q9BQ70 676 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 EIF2AQ9BY44 585 aaKnown RBP7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 GCOM2Q9BZD3 368 aaPredicted RBP7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 CXCL16Q9H2A7 254 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 SMOC1Q9H4F8 434 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 NRDE2Q9H7Z3 1164 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 TLE6Q9H808 572 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 TTC12Q9H892 705 aaPredicted RBP7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 ZFP64Q9NPA5 681 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 AGPAT5Q9NUQ2 364 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 TBC1D13Q9NVG8 400 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 OXSMQ9NWU1 459 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 H2AFY2Q9P0M6 372 aaPredicted RBP7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 CACNG4Q9UBN1 327 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 MUTYHQ9UIF7 546 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 NUDT5Q9UKK9 219 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 SRPK3Q9UPE1 567 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 USP15Q9Y4E8 981 aaPredicted RBP7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 HES2Q9Y543 173 aa7.05□□□□□ -1.28
HMGN1P17-201ENST00000513734 TCHHQ07283 1943 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 ALG1L2C9J202 215 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 SCDO00767 359 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 TBX3O15119 743 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 MARCH6O60337 910 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 NEMFO60524 1076 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 USO1O60763 962 aaKnown RBP7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 MED24O75448 989 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 TADA3O75528 432 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 OFD1O75665 1012 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 DDHD2O94830 711 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 MPOP05164 745 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 EDN1P05305 212 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 XBP1P17861 261 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 SFPQP23246 707 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 MCM7P33993 719 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 LSSP48449 732 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 SLC11A1P49279 550 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 GUCY2FP51841 1108 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 BCAR1P56945 870 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 ERVFRD-1P60508 538 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 OCRLQ01968 901 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 COASYQ13057 564 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 CAPSQ13938 189 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 ZNF174Q15697 407 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 ATP13A4Q4VNC1 1196 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 TMEM31Q5JXX7 168 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 ODR4Q5SWX8 454 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 RNF219Q5W0B1 726 aaPredicted RBP7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 FSTL4Q6MZW2 842 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 MILR1Q7Z6M3 343 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 C11orf74Q86VG3 221 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 ZNF410Q86VK4 478 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 NLGN4XQ8N0W4 816 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 RNF149Q8NC42 400 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 WASF1Q92558 559 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 PEX11GQ96HA9 241 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 INTS4Q96HW7 963 aaKnown RBP7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 HSD17B14Q9BPX1 270 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 POLD4Q9HCU8 107 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 ENTPD7Q9NQZ7 604 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 SPTLC3Q9NUV7 552 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 SPG21Q9NZD8 308 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 MYOTQ9UBF9 498 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 APOBEC2Q9Y235 224 aaKnown RBP7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 NUB1Q9Y5A7 615 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 PCDHB4Q9Y5E5 795 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 PCDHB2Q9Y5E7 798 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 ATP23Q9Y6H3 246 aa7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 OAS3Q9Y6K5 1087 aaKnown RBP7.04□□□□□ -1.28
HMGN1P17-201ENST00000513734 COL4A3Q01955 1670 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 CACNA1HO95180 2353 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 TSPAN1O60635 241 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 CLASP2O75122 1294 aaKnown RBP7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 LTFP02788 710 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 PDGFRBP09619 1106 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 GLRA2P23416 452 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 PMLP29590 882 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 TECP42680 631 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 RARRES1P49788 294 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 TOB1P50616 345 aaPredicted RBP7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 UBE3AQ05086 875 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 MBTD1Q05BQ5 628 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 TUSC3Q13454 348 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 FIGNQ5HY92 759 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 NOMO2Q5JPE7 1267 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 ERICH6BQ5W0A0 696 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 CPZQ66K79 652 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 MAEAQ7L5Y9 396 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 ATG4DQ86TL0 474 aaPredicted RBP7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 SPATS2Q86XZ4 545 aaKnown RBP7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 NOSTRINQ8IVI9 506 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 VPS52Q8N1B4 723 aa7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 C12orf76Q8N812 135 aaPredicted RBP7.03□□□□□ -1.28
HMGN1P17-201ENST00000513734 PSPC1Q8WXF1 523 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms